RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 CNNM3Q8NE01 707 aa28.62■■■□□ 2.17
FANCA-221ENST00000566889 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
FANCA-221ENST00000566889 CCDC102AQ96A19 550 aa28.62■■■□□ 2.17
FANCA-221ENST00000566889 DESI2Q9BSY9 194 aa28.62■■■□□ 2.17
FANCA-221ENST00000566889 ZNF18P17022 549 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 LTV1Q96GA3 475 aaPredicted RBP28.61■■■□□ 2.17
FANCA-221ENST00000566889 DACH1Q9UI36 760 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 HEG1Q9ULI3 1381 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 CHGBP05060 677 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 CCDC102BQ68D86 513 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 DDX46Q7L014 1031 aaKnown RBP28.61■■■□□ 2.17
FANCA-221ENST00000566889 VIPAS39Q9H9C1 493 aa28.61■■■□□ 2.17
FANCA-221ENST00000566889 HOOK1Q9UJC3 728 aaKnown RBP28.61■■■□□ 2.17
FANCA-221ENST00000566889 DIP2BQ9P265 1576 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 LMO7Q8WWI1 1683 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 KIF28PB7ZC32 967 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 PIP4K2BP78356 416 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 SWT1Q5T5J6 900 aaKnown RBP28.6■■■□□ 2.17
FANCA-221ENST00000566889 RESP18Q5W5W9 173 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 SHC4Q6S5L8 630 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 ADGRG1Q9Y653 693 aa28.6■■■□□ 2.17
FANCA-221ENST00000566889 AKR1B15C9JRZ8 316 aaPredicted RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 MARCKSP29966 332 aaPredicted RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 TFCP2Q12800 502 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 PTPN21Q16825 1174 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 WHAMMP3Q1A5X7 153 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 AKAP4Q5JQC9 854 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 METTL16Q86W50 562 aaKnown RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 RAI14Q9P0K7 980 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 A0A087WUV0 522 aaPredicted RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 DNAJC21Q5F1R6 531 aaKnown RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 CTCFLQ8NI51 663 aaPredicted RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 ENOX1Q8TC92 643 aaKnown RBP28.59■■■□□ 2.17
FANCA-221ENST00000566889 NDUFB9Q9Y6M9 179 aa28.59■■■□□ 2.17
FANCA-221ENST00000566889 ADAMTS13Q76LX8 1427 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 CTAGE9A4FU28 777 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 HSPD1P10809 573 aaKnown RBP28.58■■■□□ 2.17
FANCA-221ENST00000566889 PAXIP1Q6ZW49 1069 aaPredicted RBP28.58■■■□□ 2.17
FANCA-221ENST00000566889 PCDHA5Q9Y5H7 936 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 EIF5P55010 431 aaKnown RBP28.58■■■□□ 2.17
FANCA-221ENST00000566889 ZMYM1Q5SVZ6 1142 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 MMS22LQ6ZRQ5 1243 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 USHBP1Q8N6Y0 703 aa28.58■■■□□ 2.17
FANCA-221ENST00000566889 IGKV5-2P06315 115 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 VSNL1P62760 191 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 KIF4BQ2VIQ3 1234 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 DRC1Q96MC2 740 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 DBNDD2Q9BQY9 259 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.57■■■□□ 2.16
FANCA-221ENST00000566889 IRX2Q9BZI1 471 aaPredicted RBP28.57■■■□□ 2.16
FANCA-221ENST00000566889 FAM204AQ9H8W3 233 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 LZTFL1Q9NQ48 299 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 DDX21Q9NR30 783 aaKnown RBP eCLIP28.57■■■□□ 2.16
FANCA-221ENST00000566889 CTAGE15A4D2H0 777 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 CTAGE8P0CG41 777 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 AARSP49588 968 aaKnown RBP eCLIP28.57■■■□□ 2.16
FANCA-221ENST00000566889 MMP14P50281 582 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 NEXNQ0ZGT2 675 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 WDR93Q6P2C0 686 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 CHST3Q7LGC8 479 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 TADA2BQ86TJ2 420 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 CTAGE6Q86UF2 777 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 NUTM2AQ8IVF1 878 aaPredicted RBP28.57■■■□□ 2.16
FANCA-221ENST00000566889 CTAGE4Q8IX94 777 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 MLKLQ8NB16 471 aa28.57■■■□□ 2.16
FANCA-221ENST00000566889 PDE4BQ07343 736 aa28.56■■■□□ 2.16
FANCA-221ENST00000566889 SUGCTQ9HAC7 445 aa28.56■■■□□ 2.16
FANCA-221ENST00000566889 NFE2L3Q9Y4A8 694 aa28.56■■■□□ 2.16
FANCA-221ENST00000566889 OVOS2A0A0G2JMS6 1433 aa28.56■■■□□ 2.16
FANCA-221ENST00000566889 MAP3K15Q6ZN16 1313 aa28.56■■■□□ 2.16
FANCA-221ENST00000566889 CPLX1O14810 134 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 RFX5P48382 616 aaPredicted RBP28.55■■■□□ 2.16
FANCA-221ENST00000566889 NR1I3Q14994 352 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 PTPN12Q05209 780 aaKnown RBP28.55■■■□□ 2.16
FANCA-221ENST00000566889 PTPAQ15257 358 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 MCTP2Q6DN12 878 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 FOXP4Q8IVH2 680 aaPredicted RBP28.55■■■□□ 2.16
FANCA-221ENST00000566889 AFAP1L1Q8TED9 768 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 CEP89Q96ST8 783 aa28.55■■■□□ 2.16
FANCA-221ENST00000566889 ZNF569Q5MCW4 686 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 RASGRP2Q7LDG7 609 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.54■■■□□ 2.16
FANCA-221ENST00000566889 PLEKHG1Q9ULL1 1385 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 SOWAHDA6NJG2 315 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 NEURL1BA8MQ27 555 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 BMP6P22004 513 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 GCKRQ14397 625 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 MTF1Q14872 753 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 CCDC91Q7Z6B0 441 aa28.54■■■□□ 2.16
FANCA-221ENST00000566889 MARF1Q9Y4F3 1742 aaKnown RBP28.53■■■□□ 2.16
FANCA-221ENST00000566889 LOC102724159A0A0B4J2E5 919 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 RHOXF2BP0C7M4 288 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 PWP2Q15269 919 aaKnown RBP28.53■■■□□ 2.16
FANCA-221ENST00000566889 LONRF3Q496Y0 759 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 EPHA10Q5JZY3 1008 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 RIC3Q7Z5B4 369 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 RHOXF2Q9BQY4 288 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 KCNH3Q9ULD8 1083 aa28.53■■■□□ 2.16
FANCA-221ENST00000566889 TTF2Q9UNY4 1162 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms