RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 WDR24Q96S15 920 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 FUT8Q9BYC5 575 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 WDR19Q8NEZ3 1342 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 A0A087WZG4 1122 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 PRC1O43663 620 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 STX10O60499 249 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 FOXO4P98177 505 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 GOLGA8FQ08AF8 430 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 GOLGA8DPQ0D2H9 430 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 PTPAQ15257 358 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 ELOA2Q8IYF1 753 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-215ENST00000566843 ARFGAP3Q9NP61 516 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 FOXP2O15409 715 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 RESP18Q5W5W9 173 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 NEUROD6Q96NK8 337 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 BAG1Q99933 345 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-215ENST00000566843 EPC1Q9H2F5 836 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 GJB4Q9NTQ9 266 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 FANCLQ9NW38 375 aa18.03■□□□□ 0.48
COMMD4-215ENST00000566843 MARCKSP29966 332 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-215ENST00000566843 ANTXR2P58335 489 aa18.02■□□□□ 0.48
COMMD4-215ENST00000566843 GNG11P61952 73 aa18.02■□□□□ 0.48
COMMD4-215ENST00000566843 PNOCQ13519 176 aa18.02■□□□□ 0.48
COMMD4-215ENST00000566843 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
COMMD4-215ENST00000566843 PARD6BQ9BYG5 372 aa18.02■□□□□ 0.48
COMMD4-215ENST00000566843 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-215ENST00000566843 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.47
COMMD4-215ENST00000566843 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.47
COMMD4-215ENST00000566843 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.47
COMMD4-215ENST00000566843 NFATC2IPQ8NCF5 419 aa18.02■□□□□ 0.47
COMMD4-215ENST00000566843 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.47
COMMD4-215ENST00000566843 H7C1W4 665 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 CPLX1O14810 134 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 TIMM10P62072 90 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
COMMD4-215ENST00000566843 TC2NQ8N9U0 490 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 EXOC4Q96A65 974 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
COMMD4-215ENST00000566843 CPDO75976 1380 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 KRBA2Q6ZNG9 492 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 GOLGA1Q92805 767 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-215ENST00000566843 MAP3K14Q99558 947 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
COMMD4-215ENST00000566843 MAP2K7O14733 419 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 BRD3Q15059 726 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 FOXP4Q8IVH2 680 aaPredicted RBP18■□□□□ 0.47
COMMD4-215ENST00000566843 EIF4ENIF1Q9NRA8 985 aaKnown RBP18■□□□□ 0.47
COMMD4-215ENST00000566843 CCDC151A5D8V7 595 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 CUTAO60888 179 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
COMMD4-215ENST00000566843 TXLNAP40222 546 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 PIP4K2BP78356 416 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 NCOA7Q8NI08 942 aa18■□□□□ 0.47
COMMD4-215ENST00000566843 IPO4Q8TEX9 1081 aaKnown RBP18■□□□□ 0.47
COMMD4-215ENST00000566843 MAP3K15Q6ZN16 1313 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
COMMD4-215ENST00000566843 ZNF18P17022 549 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 PDE4BQ07343 736 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 IQUBQ8NA54 791 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 PLBD2Q8NHP8 589 aa17.99■□□□□ 0.47
COMMD4-215ENST00000566843 VGLL3A8MV65 326 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 FGAP02671 866 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 BMP6P22004 513 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 MDM2Q00987 491 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-215ENST00000566843 ZSCAN26Q16670 478 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 CCDC102BQ68D86 513 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-215ENST00000566843 MSL3Q8N5Y2 521 aaKnown RBP17.98■□□□□ 0.47
COMMD4-215ENST00000566843 AK7Q96M32 723 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 ROBO1Q9Y6N7 1651 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-215ENST00000566843 HAND2P61296 217 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 LONRF2Q1L5Z9 754 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 LONRF3Q496Y0 759 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 SPECC1LQ69YQ0 1117 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 GOLGA5Q8TBA6 731 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 HNRNPLLQ8WVV9 542 aaKnown RBP17.98■□□□□ 0.47
COMMD4-215ENST00000566843 DHX58Q96C10 678 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 CCDC34Q96HJ3 373 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
COMMD4-215ENST00000566843 EYA2O00167 538 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 CIAO1O76071 339 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
COMMD4-215ENST00000566843 KRT40Q6A162 431 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 CDC27P30260 824 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 PTPN21Q16825 1174 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms