RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 A0A0G2JLW4 131 aa19.51■□□□□ 0.71
CMTM3-213ENST00000566756 ME1P48163 572 aa19.51■□□□□ 0.71
CMTM3-213ENST00000566756 FKBP4Q02790 459 aaKnown RBP eCLIP19.51■□□□□ 0.71
CMTM3-213ENST00000566756 CEBPZQ03701 1054 aaKnown RBP19.51■□□□□ 0.71
CMTM3-213ENST00000566756 SYCP1Q15431 976 aa19.51■□□□□ 0.71
CMTM3-213ENST00000566756 C11orf57Q6ZUT1 292 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-213ENST00000566756 CCDC94Q9BW85 323 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-213ENST00000566756 SRP68Q9UHB9 627 aaKnown RBP19.51■□□□□ 0.71
CMTM3-213ENST00000566756 TRIM37O94972 964 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 FGAP02671 866 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 AMIGO3Q86WK7 504 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 CEP57L1Q8IYX8 460 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 ZNF710Q8N1W2 664 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 BPIFA3Q9BQP9 254 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 AKAP11Q9UKA4 1901 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 PRC1O43663 620 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 RFC4P35249 363 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
CMTM3-213ENST00000566756 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.5■□□□□ 0.71
CMTM3-213ENST00000566756 NRBP1Q9UHY1 535 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 PCDHA7Q9UN72 937 aa19.5■□□□□ 0.71
CMTM3-213ENST00000566756 BECN2A8MW95 431 aa19.49■□□□□ 0.71
CMTM3-213ENST00000566756 RIOK3O14730 519 aaKnown RBP19.49■□□□□ 0.71
CMTM3-213ENST00000566756 WASHC4Q2M389 1173 aa19.49■□□□□ 0.71
CMTM3-213ENST00000566756 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
CMTM3-213ENST00000566756 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
CMTM3-213ENST00000566756 PAXBP1Q9Y5B6 917 aa19.49■□□□□ 0.71
CMTM3-213ENST00000566756 ADORA1P30542 326 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 IGHMBP2P38935 993 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 RALYLQ86SE5 291 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 DHX40Q8IX18 779 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 CACTINQ8WUQ7 758 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 CDC5LQ99459 802 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 KCND1Q9NSA2 647 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 HPS5Q9UPZ3 1129 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 FGFR2P21802 821 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 LRMPQ12912 555 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 TTF1Q15361 905 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-213ENST00000566756 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 BICDL1Q6ZP65 573 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 LRRC8AQ8IWT6 810 aa19.48■□□□□ 0.71
CMTM3-213ENST00000566756 KLF18A0A0U1RQI7 1052 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 ZNF213O14771 459 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 ZAP70P43403 619 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 PUM3Q15397 648 aaKnown RBP19.47■□□□□ 0.71
CMTM3-213ENST00000566756 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 ANKRD7Q92527 254 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 LPIN2Q92539 896 aa19.47■□□□□ 0.71
CMTM3-213ENST00000566756 GTF2E1P29083 439 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-213ENST00000566756 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 MYSM1Q5VVJ2 828 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 ORC3Q9UBD5 711 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-213ENST00000566756 A0A1B0GUL6 1792 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 GOLGA8BA8MQT2 603 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 PLSCR1O15162 318 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 GPAA1O43292 621 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 FOSBP53539 338 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 ANTXR2P58335 489 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 GUCY1B3Q02153 619 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 STK38Q15208 465 aa19.46■□□□□ 0.71
CMTM3-213ENST00000566756 NBPF5PQ86XG9 351 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-213ENST00000566756 PUS7LQ9H0K6 701 aaKnown RBP19.46■□□□□ 0.71
CMTM3-213ENST00000566756 RXRBP28702 533 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 ADD2P35612 726 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 GSDMDP57764 484 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 SCARF1Q14162 830 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 KIAA1468Q9P260 1216 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 IMPACTQ9P2X3 320 aa19.45■□□□□ 0.7
CMTM3-213ENST00000566756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
CMTM3-213ENST00000566756 CPLX1O14810 134 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 SPTLC2O15270 562 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 SF3A1Q15459 793 aaKnown RBP19.44■□□□□ 0.7
CMTM3-213ENST00000566756 NLRP3Q96P20 1036 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 CDKL5O76039 1030 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 TNNT1P13805 278 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 TRDNQ13061 729 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 TIGD1Q96MW7 591 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 SDF4Q9BRK5 362 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 ZMYM6O95789 1325 aa19.44■□□□□ 0.7
CMTM3-213ENST00000566756 TAF1P21675 1872 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 CMA1P23946 247 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 HAND2P61296 217 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 SYNE3Q6ZMZ3 975 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 SMAP1Q8IYB5 467 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 BSDC1Q9NW68 430 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 UQCRFS1P1P0C7P4 283 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 SLC5A1P13866 664 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms