RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
SIN3A-207ENST00000566640 SCAF8Q9UPN6 1271 aaKnown RBP8.88□□□□□ -0.99
SIN3A-207ENST00000566640 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
SIN3A-207ENST00000566640 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 TK2O00142 265 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 TRPA1O75762 1119 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 IGHMBP2P38935 993 aaKnown RBP8.87□□□□□ -0.99
SIN3A-207ENST00000566640 MMP14P50281 582 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 PRAMEF18Q5VWM3 479 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 SLC4A10Q6U841 1118 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 MOB2Q70IA6 237 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 LINS1Q8NG48 757 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 DNAAF4Q8WXU2 420 aa8.87□□□□□ -0.99
SIN3A-207ENST00000566640 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 PAPPA2Q9BXP8 1791 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
SIN3A-207ENST00000566640 CHRNDQ07001 517 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 AMHR2Q16671 573 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 C15orf52Q6ZUT6 534 aaKnown RBP8.86□□□□□ -0.99
SIN3A-207ENST00000566640 OGFOD1Q8N543 542 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 ANKRD2Q9GZV1 360 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
SIN3A-207ENST00000566640 UBE2Q2LH0YL09 131 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 SNAP23O00161 211 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 SASH1O94885 1247 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 OATP04181 439 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 FOXO4P98177 505 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 SLFN5Q08AF3 891 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 BEND3Q5T5X7 828 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 TTLL5Q6EMB2 1281 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 METTL3Q86U44 580 aaKnown RBP8.85□□□□□ -0.99
SIN3A-207ENST00000566640 CERS5Q8N5B7 392 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
SIN3A-207ENST00000566640 CD209Q9NNX6 404 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 SMC4Q9NTJ3 1288 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
SIN3A-207ENST00000566640 TM4SF4P48230 202 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 GTF2IP78347 998 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 NOM1Q5C9Z4 860 aaKnown RBP8.84□□□□□ -0.99
SIN3A-207ENST00000566640 LDLRAD1Q5T700 205 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 NUDT18Q6ZVK8 323 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 CTU1Q7Z7A3 348 aaKnown RBP8.84□□□□□ -0.99
SIN3A-207ENST00000566640 KIAA0825Q8IV33 1275 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 SSH1Q8WYL5 1049 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 TATDN2Q93075 761 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 MPHOSPH8Q99549 860 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 ZNF646O15015 1829 aaPredicted RBP8.84□□□□□ -0.99
SIN3A-207ENST00000566640 PSME4Q14997 1843 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 HTTP42858 3142 aa8.84□□□□□ -0.99
SIN3A-207ENST00000566640 TNRC18O15417 2968 aaPredicted RBP8.84□□□□□ -0.99
SIN3A-207ENST00000566640 COL1A1P02452 1464 aaPredicted RBP8.83□□□□□ -1
SIN3A-207ENST00000566640 SSC5DA1L4H1 1573 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 ANKRD18BA2A2Z9 1011 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 SMAPO00193 183 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 IL1R1P14778 569 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 NF2P35240 595 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
SIN3A-207ENST00000566640 MAP3K11Q16584 847 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 APOBEC3FQ8IUX4 373 aaKnown RBP8.83□□□□□ -1
SIN3A-207ENST00000566640 MRPL50Q8N5N7 158 aaKnown RBP8.83□□□□□ -1
SIN3A-207ENST00000566640 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 NLRP7Q8WX94 980 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 NBPF3Q9H094 633 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
SIN3A-207ENST00000566640 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
SIN3A-207ENST00000566640 TAF5LO75529 589 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 TBC1D8O95759 1140 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 FKBP1AP62942 108 aaKnown RBP8.82□□□□□ -1
SIN3A-207ENST00000566640 IFIT5Q13325 482 aaKnown RBP8.82□□□□□ -1
SIN3A-207ENST00000566640 SPRYD7Q5W111 196 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
SIN3A-207ENST00000566640 ZNF296Q8WUU4 475 aaPredicted RBP8.82□□□□□ -1
SIN3A-207ENST00000566640 DEFB129Q9H1M3 183 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
SIN3A-207ENST00000566640 AOX1Q06278 1338 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 GPR25O00155 361 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 GRM8O00222 908 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 KCNJ4P48050 445 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 SOX10P56693 466 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 SREBF2Q12772 1141 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
SIN3A-207ENST00000566640 DLGAP5Q15398 846 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 PKN2Q16513 984 aaKnown RBP8.81□□□□□ -1
SIN3A-207ENST00000566640 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 ARMC9Q7Z3E5 817 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 SRCIN1Q9C0H9 1055 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 C9orf78Q9NZ63 289 aaPredicted RBP8.81□□□□□ -1
SIN3A-207ENST00000566640 FZD1Q9UP38 647 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
SIN3A-207ENST00000566640 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms