RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ADD2P35612 726 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 NCAPHQ15003 741 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
CDH1-209ENST00000566510 UBASH3AP57075 661 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 KMT5BQ4FZB7 885 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 MYH7P12883 1935 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 ZBTB43O43298 467 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
CDH1-209ENST00000566510 EVA1CP58658 441 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 HSP90AA4PQ58FG1 418 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 SHC4Q6S5L8 630 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
CDH1-209ENST00000566510 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 ZNF397Q8NF99 534 aaPredicted RBP16.44■□□□□ 0.22
CDH1-209ENST00000566510 AIDAQ96BJ3 306 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
CDH1-209ENST00000566510 RIPOR2Q9Y4F9 1068 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 CPDO75976 1380 aa16.44■□□□□ 0.22
CDH1-209ENST00000566510 ANKRD18BA2A2Z9 1011 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 SH2B2O14492 632 aaPredicted RBP16.43■□□□□ 0.22
CDH1-209ENST00000566510 CSF1RP07333 972 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 HLFQ16534 295 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
CDH1-209ENST00000566510 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
CDH1-209ENST00000566510 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
CDH1-209ENST00000566510 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 DPF2Q92785 391 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 MYO5AQ9Y4I1 1855 aaKnown RBP16.42■□□□□ 0.22
CDH1-209ENST00000566510 PHKA1P46020 1223 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 MYL5Q02045 173 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
CDH1-209ENST00000566510 ZNF771Q7L3S4 317 aaPredicted RBP16.42■□□□□ 0.22
CDH1-209ENST00000566510 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 IKBKBO14920 756 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 PDE6AP16499 860 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
CDH1-209ENST00000566510 ERCC6LQ2NKX8 1250 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 LONRF3Q496Y0 759 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
CDH1-209ENST00000566510 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
CDH1-209ENST00000566510 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 PPP6R2O75170 966 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 STARD3NLO95772 234 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 PARP4Q9UKK3 1724 aaKnown RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 IRS4O14654 1257 aaPredicted RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 CTSWP56202 376 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 PTPAQ15257 358 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
CDH1-209ENST00000566510 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 KCNH3Q9ULD8 1083 aa16.41■□□□□ 0.22
CDH1-209ENST00000566510 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 RANBP6O60518 1105 aaKnown RBP16.4■□□□□ 0.22
CDH1-209ENST00000566510 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
CDH1-209ENST00000566510 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
CDH1-209ENST00000566510 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
CDH1-209ENST00000566510 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 ZKSCAN3Q9BRR0 538 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 NAPBQ9H115 298 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 HSD3B7Q9H2F3 369 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 CBFA2T2O43439 604 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 PDE8BO95263 885 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 ATP2B1P20020 1258 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 LRRN4CLQ8ND94 238 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms