RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 SPATA5Q8NB90 893 aa23.36■■□□□ 1.33
CPNE7-208ENST00000566398 HMG20BQ9P0W2 317 aa23.36■■□□□ 1.33
CPNE7-208ENST00000566398 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
CPNE7-208ENST00000566398 HOOK2Q96ED9 719 aa23.35■■□□□ 1.33
CPNE7-208ENST00000566398 RPAP1Q9BWH6 1393 aaPredicted RBP23.35■■□□□ 1.33
CPNE7-208ENST00000566398 PI16Q6UXB8 463 aa23.34■■□□□ 1.33
CPNE7-208ENST00000566398 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
CPNE7-208ENST00000566398 WNK4Q96J92 1243 aa23.34■■□□□ 1.33
CPNE7-208ENST00000566398 DBNDD2Q9BQY9 259 aa23.34■■□□□ 1.33
CPNE7-208ENST00000566398 CHMP4BQ9H444 224 aaKnown RBP23.34■■□□□ 1.33
CPNE7-208ENST00000566398 GAKO14976 1311 aa23.33■■□□□ 1.33
CPNE7-208ENST00000566398 ZBTB48P10074 688 aaPredicted RBP23.33■■□□□ 1.33
CPNE7-208ENST00000566398 CCDC158Q5M9N0 1113 aa23.33■■□□□ 1.33
CPNE7-208ENST00000566398 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.33
CPNE7-208ENST00000566398 USP40Q9NVE5 1235 aa23.33■■□□□ 1.33
CPNE7-208ENST00000566398 MYH13Q9UKX3 1938 aa23.33■■□□□ 1.32
CPNE7-208ENST00000566398 MCAMP43121 646 aa23.32■■□□□ 1.32
CPNE7-208ENST00000566398 TM4SF4P48230 202 aa23.32■■□□□ 1.32
CPNE7-208ENST00000566398 ERC1Q8IUD2 1116 aa23.32■■□□□ 1.32
CPNE7-208ENST00000566398 FAM151AQ8WW52 585 aa23.32■■□□□ 1.32
CPNE7-208ENST00000566398 ZBTB40Q9NUA8 1239 aa23.32■■□□□ 1.32
CPNE7-208ENST00000566398 MANSC4A6NHS7 340 aaPredicted RBP23.31■■□□□ 1.32
CPNE7-208ENST00000566398 MECOMQ03112 1051 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 NFIAQ12857 509 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.31■■□□□ 1.324e-10■■■□□ 18.4
CPNE7-208ENST00000566398 ELP3Q9H9T3 547 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 EXOC6BQ9Y2D4 811 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 CSADQ9Y600 493 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
CPNE7-208ENST00000566398 HMMRO75330 724 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 CAPN15O75808 1086 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 TCP10Q12799 353 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 HSP90AB4PQ58FF6 505 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 DCAF15Q66K64 600 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 TBC1D9Q6ZT07 1266 aa23.3■■□□□ 1.32
CPNE7-208ENST00000566398 RPAP2Q8IXW5 612 aaPredicted RBP23.3■■□□□ 1.32
CPNE7-208ENST00000566398 FAM163AQ96GL9 167 aaPredicted RBP23.3■■□□□ 1.32
CPNE7-208ENST00000566398 BTDP43251 543 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 GSTO1P78417 241 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 MAP3K9P80192 1104 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 VGLL4Q14135 290 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-208ENST00000566398 WRNIP1Q96S55 665 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 FAM198AQ9UFP1 575 aa23.29■■□□□ 1.32
CPNE7-208ENST00000566398 DBNLQ9UJU6 430 aaKnown RBP23.29■■□□□ 1.32
CPNE7-208ENST00000566398 INHBEP58166 350 aa23.28■■□□□ 1.32
CPNE7-208ENST00000566398 C20orf194Q5TEA3 1177 aa23.28■■□□□ 1.32
CPNE7-208ENST00000566398 EAF2Q96CJ1 260 aaPredicted RBP23.28■■□□□ 1.32
CPNE7-208ENST00000566398 OPTNQ96CV9 577 aa23.28■■□□□ 1.32
CPNE7-208ENST00000566398 ZNF512BQ96KM6 892 aaPredicted RBP23.28■■□□□ 1.32
CPNE7-208ENST00000566398 SNRKQ9NRH2 765 aa23.28■■□□□ 1.32
CPNE7-208ENST00000566398 TLR7Q9NYK1 1049 aaKnown RBP23.28■■□□□ 1.32
CPNE7-208ENST00000566398 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
CPNE7-208ENST00000566398 GJA5P36382 358 aa23.27■■□□□ 1.32
CPNE7-208ENST00000566398 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
CPNE7-208ENST00000566398 IDI2Q9BXS1 227 aa23.27■■□□□ 1.32
CPNE7-208ENST00000566398 ZNF341Q9BYN7 854 aa23.27■■□□□ 1.32
CPNE7-208ENST00000566398 CCDC8Q9H0W5 538 aaPredicted RBP23.27■■□□□ 1.32
CPNE7-208ENST00000566398 RFX7Q2KHR2 1363 aa23.27■■□□□ 1.31
CPNE7-208ENST00000566398 ALDH1A1P00352 501 aa23.26■■□□□ 1.31
CPNE7-208ENST00000566398 LDHCP07864 332 aa23.26■■□□□ 1.31
CPNE7-208ENST00000566398 RGS3P49796 1198 aa23.26■■□□□ 1.31
CPNE7-208ENST00000566398 ZNF384Q8TF68 577 aa23.26■■□□□ 1.31
CPNE7-208ENST00000566398 GPR75-ASB3A0A0A6YYF3 556 aa23.25■■□□□ 1.31
CPNE7-208ENST00000566398 ENTPD3O75355 529 aa23.25■■□□□ 1.31
CPNE7-208ENST00000566398 TBC1D8O95759 1140 aa23.25■■□□□ 1.31
CPNE7-208ENST00000566398 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
CPNE7-208ENST00000566398 AACSQ86V21 672 aa23.25■■□□□ 1.31
CPNE7-208ENST00000566398 WDHD1O75717 1129 aaPredicted RBP23.24■■□□□ 1.31
CPNE7-208ENST00000566398 IFNL1Q8IU54 200 aa23.24■■□□□ 1.31
CPNE7-208ENST00000566398 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
CPNE7-208ENST00000566398 SPDYE5A6NIY4 337 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 ZAP70P43403 619 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 PICALMQ13492 652 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 ZSCAN29Q8IWY8 852 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-208ENST00000566398 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 RHPN1Q8TCX5 695 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 ZKSCAN4Q969J2 545 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-208ENST00000566398 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 OTUD5Q96G74 571 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 ABHD8Q96I13 439 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 IL1RAPL2Q9NP60 686 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 SNCAIPQ9Y6H5 919 aa23.23■■□□□ 1.31
CPNE7-208ENST00000566398 APBB1O00213 710 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 CYP2E1P05181 493 aaPredicted RBP23.22■■□□□ 1.31
CPNE7-208ENST00000566398 RHBDL3P58872 404 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 DGKZQ13574 1117 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 OTUD7BQ6GQQ9 843 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 NOL10Q9BSC4 688 aaKnown RBP23.22■■□□□ 1.31
CPNE7-208ENST00000566398 CFHR5Q9BXR6 569 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 MCOLN1Q9GZU1 580 aa23.22■■□□□ 1.31
CPNE7-208ENST00000566398 IGF2BP3O00425 579 aaKnown RBP eCLIP23.21■■□□□ 1.31
CPNE7-208ENST00000566398 MAP4K4O95819 1239 aaPredicted RBP23.21■■□□□ 1.31
CPNE7-208ENST00000566398 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
CPNE7-208ENST00000566398 ERO1BQ86YB8 467 aa23.21■■□□□ 1.31
CPNE7-208ENST00000566398 CLASRPQ8N2M8 674 aaKnown RBP23.21■■□□□ 1.31
CPNE7-208ENST00000566398 DDX4Q9NQI0 724 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms