RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MS4A4AQ96JQ5 239 aa22.73■■□□□ 1.23
USB1-213ENST00000566292 HPS5Q9UPZ3 1129 aa22.73■■□□□ 1.23
USB1-213ENST00000566292 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
USB1-213ENST00000566292 GNAI2P04899 355 aa22.72■■□□□ 1.23
USB1-213ENST00000566292 CDC42EP5Q6NZY7 148 aa22.72■■□□□ 1.23
USB1-213ENST00000566292 CSADQ9Y600 493 aa22.72■■□□□ 1.23
USB1-213ENST00000566292 PNMA6EA0A0J9YXQ4 647 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 RASGRF1Q13972 1273 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 TMEM57Q8N5G2 664 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 FAM151AQ8WW52 585 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 XAGE2Q96GT9 111 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 SNCAIPQ9Y6H5 919 aa22.71■■□□□ 1.23
USB1-213ENST00000566292 SOX10P56693 466 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 NFIAQ12857 509 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 CRHR2Q13324 411 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 ZKSCAN2Q63HK3 967 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 OTUD7BQ6GQQ9 843 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 OTUD5Q96G74 571 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 WRNIP1Q96S55 665 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 AKAP2Q9Y2D5 859 aa22.7■■□□□ 1.22
USB1-213ENST00000566292 DOCK2Q92608 1830 aa22.69■■□□□ 1.22
USB1-213ENST00000566292 PDS5AQ29RF7 1337 aaKnown RBP22.69■■□□□ 1.22
USB1-213ENST00000566292 SPDYE5A6NIY4 337 aa22.69■■□□□ 1.22
USB1-213ENST00000566292 TCP10Q12799 353 aa22.69■■□□□ 1.22
USB1-213ENST00000566292 BRI3BPQ8WY22 251 aa22.69■■□□□ 1.22
USB1-213ENST00000566292 ZKSCAN4Q969J2 545 aaPredicted RBP22.69■■□□□ 1.22
USB1-213ENST00000566292 HOOK2Q96ED9 719 aa22.69■■□□□ 1.22
USB1-213ENST00000566292 TNRC18O15417 2968 aaPredicted RBP22.69■■□□□ 1.22
USB1-213ENST00000566292 DCAF15Q66K64 600 aa22.68■■□□□ 1.22
USB1-213ENST00000566292 FBXO46Q6PJ61 603 aaPredicted RBP22.68■■□□□ 1.22
USB1-213ENST00000566292 MIGA2Q7L4E1 593 aa22.68■■□□□ 1.22
USB1-213ENST00000566292 ZGPATQ8N5A5 531 aaKnown RBP22.68■■□□□ 1.22
USB1-213ENST00000566292 USP40Q9NVE5 1235 aa22.68■■□□□ 1.22
USB1-213ENST00000566292 FAM198AQ9UFP1 575 aa22.68■■□□□ 1.22
USB1-213ENST00000566292 GAKO14976 1311 aa22.67■■□□□ 1.22
USB1-213ENST00000566292 CCL15-CCL14A0A0B4J2E2 113 aa22.67■■□□□ 1.22
USB1-213ENST00000566292 GTF2A2P52657 109 aa22.67■■□□□ 1.22
USB1-213ENST00000566292 CCL15Q16663 113 aa22.67■■□□□ 1.22
USB1-213ENST00000566292 MVPQ14764 893 aaKnown RBP22.66■■□□□ 1.22
USB1-213ENST00000566292 ERO1BQ86YB8 467 aa22.66■■□□□ 1.22
USB1-213ENST00000566292 NEUROD6Q96NK8 337 aa22.66■■□□□ 1.22
USB1-213ENST00000566292 ZNF341Q9BYN7 854 aa22.66■■□□□ 1.22
USB1-213ENST00000566292 ABCF2Q9UG63 623 aa22.66■■□□□ 1.22
USB1-213ENST00000566292 INPP5BP32019 993 aa22.65■■□□□ 1.22
USB1-213ENST00000566292 ZFPM1Q8IX07 1006 aa22.65■■□□□ 1.22
USB1-213ENST00000566292 RFX7Q2KHR2 1363 aa22.64■■□□□ 1.22
USB1-213ENST00000566292 IRF6O14896 467 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 CAP1Q01518 475 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 G3BP1Q13283 466 aaKnown RBP eCLIP22.64■■□□□ 1.21
USB1-213ENST00000566292 OTOP1Q7RTM1 612 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 DZIP1Q86YF9 867 aaKnown RBP22.64■■□□□ 1.21
USB1-213ENST00000566292 FAM43AQ8N2R8 423 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 CD99L2Q8TCZ2 262 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 ZNF112Q9UJU3 913 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 TRIM17Q9Y577 477 aa22.64■■□□□ 1.21
USB1-213ENST00000566292 HTTP42858 3142 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 PPIL2Q13356 520 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 POLA2Q14181 598 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 TAF1CQ15572 869 aaPredicted RBP22.63■■□□□ 1.21
USB1-213ENST00000566292 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 FAM163AQ96GL9 167 aaPredicted RBP22.63■■□□□ 1.21
USB1-213ENST00000566292 ERO1AQ96HE7 468 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 HMG20BQ9P0W2 317 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 ATRNL1Q5VV63 1379 aa22.63■■□□□ 1.21
USB1-213ENST00000566292 RLBP1P12271 317 aa22.62■■□□□ 1.21
USB1-213ENST00000566292 SP3Q02447 781 aa22.62■■□□□ 1.21
USB1-213ENST00000566292 SPTY2D1Q68D10 685 aaPredicted RBP22.62■■□□□ 1.21
USB1-213ENST00000566292 IDI2Q9BXS1 227 aa22.62■■□□□ 1.21
USB1-213ENST00000566292 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 CETPP11597 493 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 ARID4AP29374 1257 aaPredicted RBP22.61■■□□□ 1.21
USB1-213ENST00000566292 RGS3P49796 1198 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 MECOMQ03112 1051 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 ERICH6Q7L0X2 663 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 SSH3Q8TE77 659 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 C1orf115Q9H7X2 142 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 ZFYVE28Q9HCC9 887 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 ZSWIM8A7E2V4 1837 aa22.61■■□□□ 1.21
USB1-213ENST00000566292 PDE4DIPQ5VU43 2346 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 MROH7-TTC4A0A0A0MT08 1334 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 WDHD1O75717 1129 aaPredicted RBP22.6■■□□□ 1.21
USB1-213ENST00000566292 BTDP43251 543 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 PPATQ06203 517 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 SNAPC2Q13487 334 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 GORABQ5T7V8 394 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 SLF2Q8IX21 1173 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
USB1-213ENST00000566292 SPATA5Q8NB90 893 aa22.6■■□□□ 1.21
USB1-213ENST00000566292 MYO5AQ9Y4I1 1855 aaKnown RBP22.6■■□□□ 1.21
USB1-213ENST00000566292 BTBD19C9JJ37 291 aa22.59■■□□□ 1.21
USB1-213ENST00000566292 ENTPD3O75355 529 aa22.59■■□□□ 1.21
USB1-213ENST00000566292 MCAMP43121 646 aa22.59■■□□□ 1.21
USB1-213ENST00000566292 NOL9Q5SY16 702 aaKnown RBP22.59■■□□□ 1.21
USB1-213ENST00000566292 TBC1D9Q6ZT07 1266 aa22.59■■□□□ 1.21
USB1-213ENST00000566292 ITPRIPQ8IWB1 547 aa22.59■■□□□ 1.21
USB1-213ENST00000566292 DDX4Q9NQI0 724 aaKnown RBP22.59■■□□□ 1.21
USB1-213ENST00000566292 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms