RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 MAP2K3P46734 347 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 ZNF165P49910 485 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 SDE2Q6IQ49 451 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 GDF6Q6KF10 455 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 CACTIN-AS1Q8N1I8 211 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 RGS9O75916 674 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-209ENST00000566240 ARHGEF15O94989 841 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 BPNT1O95861 308 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 EPHA1P21709 976 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 EIF6P56537 245 aaKnown RBP7.45□□□□□ -1.22
CNOT1-209ENST00000566240 ZNF252P-AS1Q0IIN9 211 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 SCARA3Q6AZY7 606 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 REXO1Q8N1G1 1221 aaKnown RBP7.45□□□□□ -1.22
CNOT1-209ENST00000566240 FERD3LQ96RJ6 166 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 CRBNQ96SW2 442 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 BRMS1Q9HCU9 246 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 MBIPQ9NS73 344 aa7.45□□□□□ -1.22
CNOT1-209ENST00000566240 H3BRJ5 948 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 SMAD7O15105 426 aaKnown RBP7.44□□□□□ -1.22
CNOT1-209ENST00000566240 ALAS2P22557 587 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 GIPRP48546 466 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 PTPN11Q06124 597 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-209ENST00000566240 AP3B2Q13367 1082 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 TNNI3KQ59H18 835 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 FBXW10Q5XX13 1052 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 GK5Q6ZS86 529 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 PDZD3Q86UT5 571 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
CNOT1-209ENST00000566240 TRIM37O94972 964 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 NCLP19338 710 aaKnown RBP7.43□□□□□ -1.22
CNOT1-209ENST00000566240 CDC25BP30305 580 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 RPL6Q02878 288 aaKnown RBP7.43□□□□□ -1.22
CNOT1-209ENST00000566240 CLCQ05315 142 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 MAP1SQ66K74 1059 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-209ENST00000566240 MPRIPQ6WCQ1 1025 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 NLGN1Q8N2Q7 840 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 IL22RA1Q8N6P7 574 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 FAM169BQ8N8A8 192 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
CNOT1-209ENST00000566240 SRPK1Q96SB4 655 aaKnown RBP7.43□□□□□ -1.22
CNOT1-209ENST00000566240 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 GSTP1P09211 210 aaKnown RBP7.42□□□□□ -1.22
CNOT1-209ENST00000566240 IMPDH2P12268 514 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 GSTM4Q03013 218 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 HGSNATQ68CP4 663 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 KANK3Q6NY19 840 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 ZNF662Q6ZS27 426 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 KCNB2Q92953 911 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 SOX17Q9H6I2 414 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-209ENST00000566240 ZNRF3Q9ULT6 936 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 PPME1Q9Y570 386 aa7.42□□□□□ -1.22
CNOT1-209ENST00000566240 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-209ENST00000566240 ARL4DP49703 201 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 GRIK5Q16478 980 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 GPAT2Q6NUI2 795 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 SLC7A3Q8WY07 619 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 EHMT1Q9H9B1 1298 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 JPH1Q9HDC5 661 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-209ENST00000566240 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
CNOT1-209ENST00000566240 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
CNOT1-209ENST00000566240 ADAMTS2O95450 1211 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 BAG6P46379 1132 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 PIP4K2BP78356 416 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 C19orf57Q0VDD7 668 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 FAM117BQ6P1L5 589 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-209ENST00000566240 C20orf204Q6ZNR8 217 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 LRP10Q7Z4F1 713 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 GOLGA6L1Q8N7Z2 621 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 DEPDC7Q96QD5 511 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
CNOT1-209ENST00000566240 SNTG2Q9NY99 539 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 GDF2Q9UK05 429 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-209ENST00000566240 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-209ENST00000566240 PCDHB14Q9Y5E9 798 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 IGF1RP08069 1367 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 SBNO2Q9Y2G9 1366 aa7.4□□□□□ -1.22
CNOT1-209ENST00000566240 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 LINC01387J3KSC0 135 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 PPM1GO15355 546 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-209ENST00000566240 ATE1O95260 518 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 CYP11A1P05108 521 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 RASA3Q14644 834 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 TXNDC11Q6PKC3 985 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 LYPD4Q6UWN0 246 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 CELF2-AS1Q8N7Q2 184 aa7.39□□□□□ -1.23
CNOT1-209ENST00000566240 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-209ENST00000566240 GPBAR1Q8TDU6 330 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms