RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 RTFDC1Q9BY42 306 aaPredicted RBP12.85□□□□□ -0.35
UBFD1-205ENST00000566136 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
UBFD1-205ENST00000566136 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
UBFD1-205ENST00000566136 GEMIN4P57678 1058 aaKnown RBP12.85□□□□□ -0.35
UBFD1-205ENST00000566136 ORC1Q13415 861 aa12.85□□□□□ -0.35
UBFD1-205ENST00000566136 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
UBFD1-205ENST00000566136 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
UBFD1-205ENST00000566136 SERPINB3P29508 390 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 MAN1A1P33908 653 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 EIF1AXP47813 144 aaKnown RBP12.84□□□□□ -0.35
UBFD1-205ENST00000566136 CLCN6P51797 869 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
UBFD1-205ENST00000566136 FEZ1Q99689 392 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 ZBTB39O15060 712 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 PGRP06401 933 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
UBFD1-205ENST00000566136 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 ERP27Q96DN0 273 aa12.84□□□□□ -0.35
UBFD1-205ENST00000566136 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 ST13P50502 369 aaKnown RBP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 NELL1Q92832 810 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 COL22A1Q8NFW1 1626 aaPredicted RBP12.83□□□□□ -0.36
UBFD1-205ENST00000566136 MYL3P08590 195 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 OXLD1Q5BKU9 147 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 RSPH1Q8WYR4 309 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 ASPSCR1Q9BZE9 553 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 TMEM260Q9NX78 707 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
UBFD1-205ENST00000566136 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
UBFD1-205ENST00000566136 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
UBFD1-205ENST00000566136 EML3Q32P44 896 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 SIX5Q8N196 739 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 USP21Q9UK80 565 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 NSD2O96028 1365 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 RBP3P10745 1247 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 VARSP26640 1264 aaKnown RBP12.82□□□□□ -0.36
UBFD1-205ENST00000566136 ANKRD42Q8N9B4 389 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
UBFD1-205ENST00000566136 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 ASMTLO95671 621 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 GTF2IP78347 998 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 CCDC89Q8N998 374 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 EIF2AK1Q9BQI3 630 aaKnown RBP12.81□□□□□ -0.36
UBFD1-205ENST00000566136 CLIC5Q9NZA1 410 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
UBFD1-205ENST00000566136 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
UBFD1-205ENST00000566136 OPLAHO14841 1288 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
UBFD1-205ENST00000566136 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
UBFD1-205ENST00000566136 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
UBFD1-205ENST00000566136 RGS12O14924 1447 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 TRIM37O94972 964 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 LMBRD2Q68DH5 695 aaPredicted RBP12.8□□□□□ -0.36
UBFD1-205ENST00000566136 PARD3BQ8TEW8 1205 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 SMAPO00193 183 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 FYB1O15117 783 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 AGR2O95994 175 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 EPHB1P54762 984 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 DGKHQ86XP1 1220 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 THNSL2Q86YJ6 484 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
UBFD1-205ENST00000566136 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 KBTBD4Q9NVX7 518 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 SIRPGQ9P1W8 387 aa12.8□□□□□ -0.36
UBFD1-205ENST00000566136 A6NCN8 305 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 KCNQ2O43526 872 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 WEE1P30291 646 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 PRSS12P56730 875 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 LHFPL2Q6ZUX7 228 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 NINLQ9Y2I6 1382 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 STAU1O95793 577 aaKnown RBP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 IGHDP01880 384 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 VDRP11473 427 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 CBX2Q14781 532 aaPredicted RBP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 C16orf86Q6ZW13 317 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
UBFD1-205ENST00000566136 MKL1Q969V6 931 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms