RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SYTL4Q96C24 671 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 SUGCTQ9HAC7 445 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 SEPT11Q9NVA2 429 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 ERLIN2O94905 339 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 AMPD2Q01433 879 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 NUTM2DQ5VT03 806 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 WDR93Q6P2C0 686 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 SMARCC2Q8TAQ2 1214 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 BRF1Q92994 677 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 DDX11Q96FC9 970 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PHACTR3Q96KR7 559 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 NUCKS1Q9H1E3 243 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 HOMER3Q9NSC5 361 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MYO6Q9UM54 1294 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 BICDL2A1A5D9 508 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MEFVO15553 781 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 PDE6BP35913 854 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 KIF22Q14807 665 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 LACTB2Q53H82 288 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 RNF187Q5TA31 235 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 EMC10Q5UCC4 262 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 LARP1Q6PKG0 1096 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 MPHOSPH6Q99547 160 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 HSD3B7Q9H2F3 369 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MRPL44Q9H9J2 332 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 CEMIPQ8WUJ3 1361 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 A6NHS1 94 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 AHCYL1O43865 530 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 BAG2O95816 211 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CHMP4BP1P59074 171 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PRPF40BQ6NWY9 871 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 ANKRD23Q86SG2 305 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 IQCA1Q86XH1 822 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 NOA1Q8NC60 698 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 SLC40A1Q9NP59 571 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 INCENPQ9NQS7 918 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 U3KPZ7 1027 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 ABCA8O94911 1581 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 TBC1D25Q3MII6 688 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CDC37L1Q7L3B6 337 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 IFNLR1Q8IU57 520 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 WDR66Q8TBY9 1149 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 LRRIQ3A6PVS8 624 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 IKBKBO14920 756 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 GNGT1P63211 74 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 TUBB4BP68371 445 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MKRN4PQ13434 485 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 TSC22D1Q15714 1073 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 DDX12PQ92771 950 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 GPATCH3Q96I76 525 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 NAP1L3Q99457 506 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 ACBD3Q9H3P7 528 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CDC42BPGQ6DT37 1551 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MIPOL1Q8TD10 442 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 SSH3Q8TE77 659 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 POLR1AO95602 1720 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 RBM5P52756 815 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-218ENST00000566029 SLC8A3P57103 927 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 COL9A3Q14050 684 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 MMTAG2Q9BU76 263 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 CAPN7Q9Y6W3 813 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA6L19H0YKK7 550 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATP1A3P13637 1013 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 LARP1BQ659C4 914 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 MKL1Q969V6 931 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 FAM163AQ96GL9 167 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATP6V0A4Q9HBG4 840 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 A0A087WWV3 80 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 IPO7O95373 1038 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 RAD9BQ6WBX8 426 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 N4BP2L2Q92802 583 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 SENP2Q9HC62 589 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 EID1Q9Y6B2 187 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ARHGAP25P42331 645 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 AMPHP49418 695 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ITSN1Q15811 1721 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATP7BP35670 1465 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 PYGBP11216 843 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 DRP2Q13474 957 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 FSIP1Q8NA03 581 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PI4K2BQ8TCG2 481 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CCDC43Q96MW1 224 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.29□□□□□ -1.88
CHD9-218ENST00000566029 SPATS2LQ9NUQ6 558 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 TUBE1Q9UJT0 475 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TPX2Q9ULW0 747 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 PCDHGA4Q9Y5G9 962 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 BIN1O00499 593 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 SASH1O94885 1247 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CCDC175P0C221 793 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PTGISQ16647 500 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ME3Q16798 604 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 KIF4BQ2VIQ3 1234 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CEP85LQ5SZL2 805 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATL3Q6DD88 541 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PARD3BQ8TEW8 1205 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CNKSR1Q969H4 720 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms