RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 RNF34Q969K3 372 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 ABCC2Q92887 1545 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 UAP1Q16222 522 aaPredicted RBP15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 SEL1L2Q5TEA6 688 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 NUP160Q12769 1436 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 KRT9P35527 623 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 KIFC2Q96AC6 838 aa15.29■□□□□ 0.04
CX3CL1-204ENST00000565912 GAS8O95995 478 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 IVLP07476 585 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 TRIM7Q9C029 511 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 AGTPBP1Q9UPW5 1226 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 GNPATO15228 680 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 STX10O60499 249 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 CCT6AP40227 531 aaKnown RBP15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 TNNC1P63316 161 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 PPP1R21Q6ZMI0 780 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 RUFY3Q7L099 469 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 VAV2P52735 878 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 EIF6P56537 245 aaKnown RBP15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 CAPN2P17655 700 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 TRAPPC3LQ5T215 181 aa15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
CX3CL1-204ENST00000565912 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 ALDH3A1P30838 453 aa15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 UBLCP1Q8WVY7 318 aaPredicted RBP15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 HAUS7Q99871 368 aa15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.04
CX3CL1-204ENST00000565912 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 PICK1Q9NRD5 415 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 VPS18Q9P253 973 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 TUBB4AP04350 444 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 SLC8A3P57103 927 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 CEP85Q6P2H3 762 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 JAKMIP2Q96AA8 810 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 CTNND2Q9UQB3 1225 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 GINS2Q9Y248 185 aa15.27■□□□□ 0.03
CX3CL1-204ENST00000565912 UFL1O94874 794 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 PRIM1P49642 420 aaKnown RBP15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 CCDC122Q5T0U0 273 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 E7EVH7 732 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 CCT6BQ92526 530 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 FAM204AQ9H8W3 233 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 ZMYM3Q14202 1370 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 SPOPO43791 374 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 A0A1B0GVL5 298 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 CRCPO75575 148 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 TNFAIP3P21580 790 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 SMTNP53814 917 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 MICALL1Q8N3F8 863 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
CX3CL1-204ENST00000565912 ZYXQ15942 572 aaKnown RBP15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 PDE4DQ08499 809 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 PFDN4Q9NQP4 134 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 GMNNO75496 209 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 TSGA10Q9BZW7 698 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 SAMD15Q9P1V8 674 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 B4E1Z4 1266 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 PLCD1P51178 756 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 TSPYL6Q8N831 410 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 MRRFQ96E11 262 aaKnown RBP15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
CX3CL1-204ENST00000565912 ERCC5P28715 1186 aaPredicted RBP15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 TRPC3Q13507 836 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 FMNL3Q8IVF7 1028 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 FAM89AQ96GI7 184 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 SNX21Q969T3 373 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 SHANK2Q9UPX8 1470 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 DAPK3O43293 454 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 CCNT1O60563 726 aaKnown RBP15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 ARFGAP2Q8N6H7 521 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 EBAG9O00559 213 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 HSPA2P54652 639 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 IFT74Q96LB3 600 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 ARMT1Q9H993 441 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms