RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TNFRSF21O75509 655 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 MAOBP27338 520 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 AKAP4Q5JQC9 854 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 PEAR1Q5VY43 1037 aaPredicted RBP7.84□□□□□ -1.15
CHD9-215ENST00000565442 GLYCTKQ8IVS8 523 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 GLIS3Q8NEA6 775 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 RC3H2Q9HBD1 1191 aaKnown RBP7.84□□□□□ -1.15
CHD9-215ENST00000565442 LATS2Q9NRM7 1088 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 EGFL7Q9UHF1 273 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 AP4E1Q9UPM8 1137 aa7.84□□□□□ -1.15
CHD9-215ENST00000565442 DYNC1LI2O43237 492 aaPredicted RBP7.83□□□□□ -1.16
CHD9-215ENST00000565442 ICMTO60725 284 aa7.83□□□□□ -1.16
CHD9-215ENST00000565442 CYP11A1P05108 521 aa7.83□□□□□ -1.16
CHD9-215ENST00000565442 FUT4P22083 530 aa7.83□□□□□ -1.16
CHD9-215ENST00000565442 EIF1AXP47813 144 aaKnown RBP7.83□□□□□ -1.16
CHD9-215ENST00000565442 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHD9-215ENST00000565442 BNIP3Q12983 259 aa7.83□□□□□ -1.16
CHD9-215ENST00000565442 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
CHD9-215ENST00000565442 GSX1Q9H4S2 264 aaPredicted RBP7.83□□□□□ -1.16
CHD9-215ENST00000565442 ASPAP45381 313 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 POU4F3Q15319 338 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 SLC38A3Q99624 504 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
CHD9-215ENST00000565442 DAGLAQ9Y4D2 1042 aa7.82□□□□□ -1.16
CHD9-215ENST00000565442 RNASE1P07998 156 aaKnown RBP7.81□□□□□ -1.16
CHD9-215ENST00000565442 MPSTP25325 297 aa7.81□□□□□ -1.16
CHD9-215ENST00000565442 SF3B2Q13435 895 aaKnown RBP7.81□□□□□ -1.16
CHD9-215ENST00000565442 CYP27C1Q4G0S4 372 aa7.81□□□□□ -1.16
CHD9-215ENST00000565442 CLEC4MQ9H2X3 399 aaPredicted RBP7.81□□□□□ -1.16
CHD9-215ENST00000565442 ZFYVE1Q9HBF4 777 aa7.81□□□□□ -1.16
CHD9-215ENST00000565442 POLIQ9UNA4 740 aa7.81□□□□□ -1.16
CHD9-215ENST00000565442 AMOTL2Q9Y2J4 779 aa7.81□□□□□ -1.16
CHD9-215ENST00000565442 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
CHD9-215ENST00000565442 CD8BP10966 210 aa7.8□□□□□ -1.16
CHD9-215ENST00000565442 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
CHD9-215ENST00000565442 PLD6Q8N2A8 252 aaKnown RBP7.8□□□□□ -1.16
CHD9-215ENST00000565442 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
CHD9-215ENST00000565442 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
CHD9-215ENST00000565442 ADAMTS6Q9UKP5 1117 aa7.8□□□□□ -1.16
CHD9-215ENST00000565442 A0A096LPE4 126 aa7.79□□□□□ -1.16
CHD9-215ENST00000565442 A0A1W2PPZ6 126 aa7.79□□□□□ -1.16
CHD9-215ENST00000565442 ECM1Q16610 540 aa7.79□□□□□ -1.16
CHD9-215ENST00000565442 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
CHD9-215ENST00000565442 LGR6Q9HBX8 967 aa7.79□□□□□ -1.16
CHD9-215ENST00000565442 ECEL1O95672 775 aa7.78□□□□□ -1.16
CHD9-215ENST00000565442 EHHADHQ08426 723 aa7.78□□□□□ -1.16
CHD9-215ENST00000565442 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
CHD9-215ENST00000565442 LRRN4CLQ8ND94 238 aa7.78□□□□□ -1.16
CHD9-215ENST00000565442 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
CHD9-215ENST00000565442 FAM13AO94988 1023 aa7.77□□□□□ -1.17
CHD9-215ENST00000565442 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
CHD9-215ENST00000565442 PI4K2BQ8TCG2 481 aa7.77□□□□□ -1.17
CHD9-215ENST00000565442 TRIM56Q9BRZ2 755 aaKnown RBP7.77□□□□□ -1.17
CHD9-215ENST00000565442 ARHGAP4P98171 946 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 PRKCQQ04759 706 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 MESP2Q0VG99 397 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 CCNJLQ8IV13 435 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 RGS22Q8NE09 1264 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 FAM84AQ96KN4 292 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 VAV3Q9UKW4 847 aa7.76□□□□□ -1.17
CHD9-215ENST00000565442 AOC2O75106 756 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 FAM87AP0C7U9 286 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 NPR3P17342 541 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 CD96P40200 585 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 USP5P45974 858 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 GRIA4P48058 902 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 AAMPQ13685 434 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 BHLHE22Q8NFJ8 381 aaPredicted RBP7.75□□□□□ -1.17
CHD9-215ENST00000565442 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
CHD9-215ENST00000565442 CDK5R2Q13319 367 aa7.74□□□□□ -1.17
CHD9-215ENST00000565442 DDX54Q8TDD1 881 aaKnown RBP7.74□□□□□ -1.17
CHD9-215ENST00000565442 TCF12Q99081 682 aa7.74□□□□□ -1.17
CHD9-215ENST00000565442 ZFYVE28Q9HCC9 887 aa7.74□□□□□ -1.17
CHD9-215ENST00000565442 PPP1R9AQ9ULJ8 1098 aa7.74□□□□□ -1.17
CHD9-215ENST00000565442 SYNGAP1Q96PV0 1343 aa7.74□□□□□ -1.17
CHD9-215ENST00000565442 B3GALT4O96024 378 aa7.73□□□□□ -1.17
CHD9-215ENST00000565442 POLR3DP05423 398 aaPredicted RBP7.73□□□□□ -1.17
CHD9-215ENST00000565442 MAPK1P28482 360 aa7.73□□□□□ -1.17
CHD9-215ENST00000565442 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
CHD9-215ENST00000565442 IFI16Q16666 785 aaKnown RBP7.73□□□□□ -1.17
CHD9-215ENST00000565442 LIN7BQ9HAP6 207 aa7.73□□□□□ -1.17
CHD9-215ENST00000565442 U3KQE9 123 aa7.73□□□□□ -1.17
CHD9-215ENST00000565442 A0A1W2PP55 124 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 LRRC10BA6NIK2 292 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 AOC3Q16853 763 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 DNAJC14Q6Y2X3 702 aaPredicted RBP7.72□□□□□ -1.17
CHD9-215ENST00000565442 CILP2Q8IUL8 1156 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 CCDC87Q9NVE4 849 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
CHD9-215ENST00000565442 FZD6O60353 706 aa7.71□□□□□ -1.18
CHD9-215ENST00000565442 FLAD1Q8NFF5 587 aa7.71□□□□□ -1.18
CHD9-215ENST00000565442 HRASLS5Q96KN8 279 aa7.71□□□□□ -1.18
CHD9-215ENST00000565442 MKNK2Q9HBH9 465 aa7.71□□□□□ -1.18
CHD9-215ENST00000565442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD9-215ENST00000565442 BRPF3Q9ULD4 1205 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms