RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 RWDD1Q9H446 243 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 STK26Q9P289 416 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 KLF15Q9UIH9 416 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 PRR12Q9ULL5 1215 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 TRAK1Q9UPV9 953 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 MRVI1Q9Y6F6 885 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 GJA3Q9Y6H8 435 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 CAMSAP1Q5T5Y3 1602 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 QRICH2Q9H0J4 1663 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 REREQ9P2R6 1566 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 DIP2CQ9Y2E4 1556 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-214ENST00000565274 AGLP35573 1532 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 DLC1Q96QB1 1528 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 ADH6P28332 368 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 SMTNP53814 917 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 TNP2Q05952 138 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 IDI1Q13907 227 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 C1QTNF12Q5T7M4 302 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 ICE2Q659A1 982 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 NLRP8Q86W28 1048 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 FCHSD1Q86WN1 690 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 PROSER2Q86WR7 435 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-214ENST00000565274 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 CHPF2Q9P2E5 772 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 HCN2Q9UL51 889 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 CLTCQ00610 1675 aaKnown RBP6.22□□□□□ -1.41
CAPN3-214ENST00000565274 PPIP5K1Q6PFW1 1433 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 CDC42BPGQ6DT37 1551 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 ARHGEF28Q8N1W1 1705 aaKnown RBP6.22□□□□□ -1.41
CAPN3-214ENST00000565274 PTPRMP28827 1452 aa6.22□□□□□ -1.41
CAPN3-214ENST00000565274 TATP17735 454 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-214ENST00000565274 MVPQ14764 893 aaKnown RBP6.21□□□□□ -1.42
CAPN3-214ENST00000565274 ALDH1L2Q3SY69 923 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 HDGFL1Q5TGJ6 251 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 ANTXR1Q9H6X2 564 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 RBM28Q9NW13 759 aaKnown RBP6.21□□□□□ -1.42
CAPN3-214ENST00000565274 CABP1Q9NZU7 370 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 POGKQ9P215 609 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 ABCF2Q9UG63 623 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 SWAP70Q9UH65 585 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
CAPN3-214ENST00000565274 PARP3Q9Y6F1 533 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 CD163L1Q9NR16 1453 aa6.21□□□□□ -1.42
CAPN3-214ENST00000565274 ARHGEF40Q8TER5 1519 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 SIGLEC1Q9BZZ2 1709 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 YTHDC2Q9H6S0 1430 aaKnown RBP6.2□□□□□ -1.42
CAPN3-214ENST00000565274 FYB1O15117 783 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 COQ9O75208 318 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
CAPN3-214ENST00000565274 ABL2P42684 1182 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 EVA1CP58658 441 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 FAM69CQ0P6D2 419 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 TMEM132EQ6IEE7 984 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 GGT6Q6P531 493 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 BICDL1Q6ZP65 573 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 RPAINQ86UA6 219 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 PLPP7Q8NBV4 271 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 LSM14AQ8ND56 463 aaKnown RBP6.2□□□□□ -1.42
CAPN3-214ENST00000565274 C1orf216Q8TAB5 229 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 ARHGAP45Q92619 1136 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 SCYL1Q96KG9 808 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 TBC1D32Q96NH3 1257 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 PLVAPQ9BX97 442 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 QTRT2Q9H974 415 aaKnown RBP6.2□□□□□ -1.42
CAPN3-214ENST00000565274 COG6Q9Y2V7 657 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 CTDP1Q9Y5B0 961 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-214ENST00000565274 USP3Q9Y6I4 520 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 TMEM131LA2VDJ0 1609 aa6.2□□□□□ -1.42
CAPN3-214ENST00000565274 A0A1W2PP64 1363 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 FSD2A1L4K1 749 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 RLBP1P12271 317 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 GATA4P43694 442 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 HDLBPQ00341 1268 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 POU5F1Q01860 360 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 CDC37Q16543 378 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 DNTTIP2Q5QJE6 756 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 DZIP1LQ8IYY4 767 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 TTC30BQ8N4P2 665 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 PANK1Q8TE04 598 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 FAM210AQ96ND0 272 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 ZIC5Q96T25 663 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 UPF2Q9HAU5 1272 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 GDPD2Q9HCC8 539 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 RRAGDQ9NQL2 400 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 STRN4Q9NRL3 753 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 FAM13BQ9NYF5 915 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 MAP3K20Q9NYL2 800 aaKnown RBP6.19□□□□□ -1.42
CAPN3-214ENST00000565274 WWC3Q9ULE0 1092 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 DDX19BQ9UMR2 479 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 RICTORQ6R327 1708 aa6.19□□□□□ -1.42
CAPN3-214ENST00000565274 AATKQ6ZMQ8 1374 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 PIK3R4Q99570 1358 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 NCOA3Q9Y6Q9 1424 aa6.18□□□□□ -1.42
CAPN3-214ENST00000565274 ATP7BP35670 1465 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms