RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-208ENST00000565160 ASXL1Q8IXJ9 1541 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
BBS4-208ENST00000565160 GHRHP01286 108 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 PLCB3Q01970 1234 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
BBS4-208ENST00000565160 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 NCAPG2Q86XI2 1143 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 PMEPA1Q969W9 287 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 HHIPQ96QV1 700 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 SETDB2Q96T68 719 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 FRRS1LQ9P0K9 344 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 STK17AQ9UEE5 414 aa6.86□□□□□ -1.31
BBS4-208ENST00000565160 NUP188Q5SRE5 1749 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 NFKBIEO00221 500 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
BBS4-208ENST00000565160 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
BBS4-208ENST00000565160 AFF1P51825 1210 aaKnown RBP6.85□□□□□ -1.31
BBS4-208ENST00000565160 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 GALNT12Q8IXK2 581 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 PRDM6Q9NQX0 595 aa6.85□□□□□ -1.31
BBS4-208ENST00000565160 PNMA6FA0A0J9YX94 578 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 NEFLP07196 543 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 NID1P14543 1247 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 IRS1P35568 1242 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 MAPK8P45983 427 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 ENOX2Q16206 610 aaKnown RBP6.84□□□□□ -1.31
BBS4-208ENST00000565160 TTC9Q92623 222 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 SPACA7Q96KW9 195 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 NPHS2Q9NP85 383 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 DZANK1Q9NVP4 752 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 WWC3Q9ULE0 1092 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 TRIM33Q9UPN9 1127 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 ARHGAP35Q9NRY4 1499 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 SHANK3Q9BYB0 1731 aa6.84□□□□□ -1.31
BBS4-208ENST00000565160 KIAA1107Q9UPP5 1409 aa6.84□□□□□ -1.32
BBS4-208ENST00000565160 DHX29Q7Z478 1369 aaKnown RBP6.83□□□□□ -1.32
BBS4-208ENST00000565160 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 LILRB5O75023 590 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 EDN3P14138 238 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 HNRNPMP52272 730 aaKnown RBP eCLIP6.83□□□□□ -1.32
BBS4-208ENST00000565160 CEP135Q66GS9 1140 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 PI16Q6UXB8 463 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 CCDC74AQ96AQ1 378 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 PBX4Q9BYU1 374 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 RBSNQ9H1K0 784 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 SUV39H2Q9H5I1 410 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 TRPC5Q9UL62 973 aaPredicted RBP6.83□□□□□ -1.32
BBS4-208ENST00000565160 MKL2Q9ULH7 1088 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 NCOA3Q9Y6Q9 1424 aa6.83□□□□□ -1.32
BBS4-208ENST00000565160 RALGAPBQ86X10 1494 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 A0A1W2PP55 124 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 BAG6P46379 1132 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
BBS4-208ENST00000565160 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
BBS4-208ENST00000565160 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
BBS4-208ENST00000565160 OSMRQ99650 979 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 USP21Q9UK80 565 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 TMEM2Q9UHN6 1383 aa6.82□□□□□ -1.32
BBS4-208ENST00000565160 MBD5Q9P267 1494 aa6.81□□□□□ -1.32
BBS4-208ENST00000565160 R3HDM1Q15032 1099 aaKnown RBP6.81□□□□□ -1.32
BBS4-208ENST00000565160 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
BBS4-208ENST00000565160 LACRTQ9GZZ8 138 aa6.81□□□□□ -1.32
BBS4-208ENST00000565160 CASZ1Q86V15 1759 aa6.81□□□□□ -1.32
BBS4-208ENST00000565160 DISP2A7MBM2 1401 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 GNB5O14775 395 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 SMNDC1O75940 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
BBS4-208ENST00000565160 KIAA0319Q5VV43 1072 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 BEND7Q8N7W2 519 aaPredicted RBP6.8□□□□□ -1.32
BBS4-208ENST00000565160 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 SCARF2Q96GP6 870 aaPredicted RBP6.8□□□□□ -1.32
BBS4-208ENST00000565160 SLC26A8Q96RN1 970 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 TCF12Q99081 682 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 RNF19AQ9NV58 838 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 NINLQ9Y2I6 1382 aa6.8□□□□□ -1.32
BBS4-208ENST00000565160 CLIP1P30622 1438 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 MST1RQ04912 1400 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 PTCH1Q13635 1447 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 PDE2AO00408 941 aaPredicted RBP6.79□□□□□ -1.32
BBS4-208ENST00000565160 COL8A1P27658 744 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
BBS4-208ENST00000565160 MSL1Q68DK7 614 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 FBXO33Q7Z6M2 555 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 DMRTC2Q8IXT2 367 aaPredicted RBP6.79□□□□□ -1.32
BBS4-208ENST00000565160 IL22RA1Q8N6P7 574 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 TMEM102Q8N9M5 508 aaPredicted RBP6.79□□□□□ -1.32
BBS4-208ENST00000565160 PLVAPQ9BX97 442 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 MYOM1P52179 1685 aa6.79□□□□□ -1.32
BBS4-208ENST00000565160 TNRC18O15417 2968 aaPredicted RBP6.78□□□□□ -1.32
BBS4-208ENST00000565160 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms