RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	DPF2	Q92785	391 aa		11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	MAP4K1	Q92918	833 aa		11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	USP26	Q9BXU7	913 aa		11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	UPF2	Q9HAU5	1272 aa	Known RBP	11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	LAMA4	Q16363	1823 aa		11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	CDK5RAP2	Q96SN8	1893 aa		11.8	□□□□□ -0.52
SIN3A-205	ENST00000564778	BAG3	O95817	575 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	USP17L8	P0C7I0	530 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	PLCG2	P16885	1265 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	BTD	P43251	543 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	CRK	P46108	304 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	PTH1R	Q03431	593 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	VPS53	Q5VIR6	699 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	MTMR14	Q8NCE2	650 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	TBC1D32	Q96NH3	1257 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	ARMT1	Q9H993	441 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	HDAC9	Q9UKV0	1011 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	ECM29	Q5VYK3	1845 aa		11.79	□□□□□ -0.52
SIN3A-205	ENST00000564778	NAV1	Q8NEY1	1877 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	RBM25	P49756	843 aa	Known RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	GMPS	P49915	693 aa	Predicted RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	SCNN1D	P51172	638 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	RHBDL3	P58872	404 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	DYNLL1	P63167	89 aa	Known RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	ALX1	Q15699	326 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	GIMAP6	Q6P9H5	292 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	KCNB2	Q92953	911 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	IL17RA	Q96F46	866 aa		11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	ZBED3	Q96IU2	234 aa	Predicted RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	NOL10	Q9BSC4	688 aa	Known RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.78	□□□□□ -0.52
SIN3A-205	ENST00000564778	LAMB1	P07942	1786 aa		11.77	□□□□□ -0.52
SIN3A-205	ENST00000564778	SPDYE2B	A6NHP3	402 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	GSG1L2	A8MUP6	293 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	SPDYE6	P0CI01	402 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	HSPA4	P34932	840 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	CFAP100	Q494V2	611 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	DPY19L2	Q6NUT2	758 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	OGFOD1	Q8N543	542 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	C22orf23	Q9BZE7	217 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	MKRN1	Q9UHC7	482 aa	Known RBP	11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	RBM8A	Q9Y5S9	174 aa	Known RBP	11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	SLC4A4	Q9Y6R1	1079 aa		11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778		U3KPZ7	1027 aa	Predicted RBP	11.77	□□□□□ -0.53
SIN3A-205	ENST00000564778	PATL2	C9JE40	543 aa	Known RBP	11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	PRKAB2	O43741	272 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	NPM3	O75607	178 aa	Known RBP	11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	MCC	P23508	829 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	ANAPC15	P60006	121 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	NECTIN1	Q15223	517 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	NACAP1	Q9BZK3	213 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	ATP8A2	Q9NTI2	1148 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	CTNNA3	Q9UI47	895 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	GJA3	Q9Y6H8	435 aa		11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	COL2A1	P02458	1487 aa	Predicted RBP	11.76	□□□□□ -0.53
SIN3A-205	ENST00000564778	GLTPD2	A6NH11	291 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	KIF3C	O14782	793 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	WDHD1	O75717	1129 aa	Predicted RBP	11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	FGA	P02671	866 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	CDC42EP5	Q6NZY7	148 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	MICALL2	Q8IY33	904 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	TEX11	Q8IYF3	940 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	IFNL3	Q8IZI9	196 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	SDR42E1	Q8WUS8	393 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	IDI2	Q9BXS1	227 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	MYOZ2	Q9NPC6	264 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	NMRK2	Q9NPI5	230 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	GPRC5D	Q9NZD1	345 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	PCDHAC2	Q9Y5I4	1007 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	FLT1	P17948	1338 aa		11.75	□□□□□ -0.53
SIN3A-205	ENST00000564778	WDR90	Q96KV7	1748 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	SHTN1	A0MZ66	631 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	SLC27A2	O14975	620 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	TOMM70	O94826	608 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	DLGAP5	Q15398	846 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	TSGA10IP	Q3SY00	556 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	SPDYE2	Q495Y8	402 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	RNF20	Q5VTR2	975 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	FKBP1C	Q5VVH2	108 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	CREB3L3	Q68CJ9	461 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	PRMT6	Q96LA8	375 aa	Predicted RBP	11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	NAPB	Q9H115	298 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	CNOT7	Q9UIV1	285 aa	Known RBP	11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	ROBO3	Q96MS0	1386 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	SCN4A	P35499	1836 aa		11.74	□□□□□ -0.53
SIN3A-205	ENST00000564778	DDN	O94850	711 aa	Predicted RBP	11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	APP	P05067	770 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	CYP21A2	P08686	494 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	MYH1	P12882	1939 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	TDO2	P48775	406 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	RBM5	P52756	815 aa	Known RBP eCLIP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms