RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CACNB3P54284 484 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 CDC42EP5Q6NZY7 148 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 CDAN1Q8IWY9 1227 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 FAM163AQ96GL9 167 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 ZNF341Q9BYN7 854 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 BCAR3O75815 825 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 CETPP11597 493 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 TIMM10P62072 90 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 CRHR2Q13324 411 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0
GTF3C1-204ENST00000564664 WRNIP1Q96S55 665 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 USP40Q9NVE5 1235 aa15.08■□□□□ 0
GTF3C1-204ENST00000564664 A0A1B0GUL7 405 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 PRDX5P30044 214 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 SP3Q02447 781 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 PPATQ06203 517 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 G3BP1Q13283 466 aaKnown RBP eCLIP15.07■□□□□ 02e-6■■□□□ 11.4
GTF3C1-204ENST00000564664 PPIL2Q13356 520 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 SNAPC2Q13487 334 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
GTF3C1-204ENST00000564664 OTUD5Q96G74 571 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 XAGE2Q96GT9 111 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 ZNF112Q9UJU3 913 aa15.07■□□□□ 0
GTF3C1-204ENST00000564664 CCL15-CCL14A0A0B4J2E2 113 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 ENTPD3O75355 529 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
GTF3C1-204ENST00000564664 TFCP2Q12800 502 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 DIXDC1Q155Q3 683 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 CCL15Q16663 113 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 IDI2Q9BXS1 227 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 TRIM17Q9Y577 477 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 SNCAIPQ9Y6H5 919 aa15.06■□□□□ 0
GTF3C1-204ENST00000564664 MYH13Q9UKX3 1938 aa15.05■□□□□ 0
GTF3C1-204ENST00000564664 ADORA1P30542 326 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 RASGRF1Q13972 1273 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 OTOP1Q7RTM1 612 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
GTF3C1-204ENST00000564664 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
GTF3C1-204ENST00000564664 EFCC1Q9HA90 598 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 GAKO14976 1311 aa15.05■□□□□ -0
GTF3C1-204ENST00000564664 IRF6O14896 467 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 IGSF3O75054 1194 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
GTF3C1-204ENST00000564664 LDHCP07864 332 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 SOX10P56693 466 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 GSTO1P78417 241 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 TCP10Q12799 353 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 TAF1CQ15572 869 aaPredicted RBP15.04■□□□□ -0
GTF3C1-204ENST00000564664 NOL9Q5SY16 702 aaKnown RBP15.04■□□□□ -0
GTF3C1-204ENST00000564664 GORABQ5T7V8 394 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 ERICH6Q7L0X2 663 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 MIGA2Q7L4E1 593 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 NEUROD6Q96NK8 337 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 FAM198AQ9UFP1 575 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 ABCF2Q9UG63 623 aa15.04■□□□□ -0
GTF3C1-204ENST00000564664 UQCRFS1P1P0C7P4 283 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 ATP8B2P98198 1209 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
GTF3C1-204ENST00000564664 MAP3K10Q02779 954 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 NFIAQ12857 509 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 DIEXFQ68CQ4 756 aaKnown RBP15.03■□□□□ -0
GTF3C1-204ENST00000564664 CLUAP1Q96AJ1 413 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 GPR108Q9NPR9 543 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
GTF3C1-204ENST00000564664 OTOFQ9HC10 1997 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 GPR75-ASB3A0A0A6YYF3 556 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 CXCL11O14625 94 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 TLR2O60603 784 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 GNRH1P01148 92 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 MIER1Q8N108 512 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 FAM43AQ8N2R8 423 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 SPATA5Q8NB90 893 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 CD99L2Q8TCZ2 262 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 KCNH4Q9UQ05 1017 aa15.02■□□□□ -0
GTF3C1-204ENST00000564664 PNMA6EA0A0J9YXQ4 647 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 BTBD19C9JJ37 291 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 ARID4AP29374 1257 aaPredicted RBP15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 INPP5BP32019 993 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 POLA2Q14181 598 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 KIF22Q14807 665 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 ANKRD23Q86SG2 305 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 SSH3Q8TE77 659 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 HMG20BQ9P0W2 317 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 PDE4DIPQ5VU43 2346 aa15.01□□□□□ -0.01
GTF3C1-204ENST00000564664 AK9Q5TCS8 1911 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 TBC1D12O60347 775 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 RGS3P49796 1198 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 MECOMQ03112 1051 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 NBPF11Q86T75 865 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
GTF3C1-204ENST00000564664 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
GTF3C1-204ENST00000564664 ARMC5Q96C12 935 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms