RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
CMTM3-208ENST00000564247 MFSD14BQ5SR56 506 aa20.44■□□□□ 0.86
CMTM3-208ENST00000564247 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
CMTM3-208ENST00000564247 WDR33Q9C0J8 1336 aaKnown RBP20.44■□□□□ 0.86
CMTM3-208ENST00000564247 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
CMTM3-208ENST00000564247 F8W031 263 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-208ENST00000564247 RNF113AO15541 343 aaKnown RBP20.43■□□□□ 0.86
CMTM3-208ENST00000564247 CHMLP26374 656 aa20.43■□□□□ 0.86
CMTM3-208ENST00000564247 ECE1P42892 770 aa20.43■□□□□ 0.86
CMTM3-208ENST00000564247 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
CMTM3-208ENST00000564247 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
CMTM3-208ENST00000564247 CDCA5Q96FF9 252 aa20.43■□□□□ 0.86
CMTM3-208ENST00000564247 LDHBP07195 334 aaKnown RBP20.42■□□□□ 0.86
CMTM3-208ENST00000564247 TMED8Q6PL24 325 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-208ENST00000564247 CAPNS2Q96L46 248 aa20.42■□□□□ 0.86
CMTM3-208ENST00000564247 GBA2Q9HCG7 927 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-208ENST00000564247 RFX7Q2KHR2 1363 aa20.42■□□□□ 0.86
CMTM3-208ENST00000564247 THSD7BQ9C0I4 1608 aa20.42■□□□□ 0.86
CMTM3-208ENST00000564247 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
CMTM3-208ENST00000564247 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
CMTM3-208ENST00000564247 SLC9C2Q5TAH2 1124 aa20.41■□□□□ 0.86
CMTM3-208ENST00000564247 PAXIP1Q6ZW49 1069 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-208ENST00000564247 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
CMTM3-208ENST00000564247 C2orf69Q8N8R5 385 aa20.41■□□□□ 0.86
CMTM3-208ENST00000564247 SUGT1Q9Y2Z0 365 aa20.41■□□□□ 0.86
CMTM3-208ENST00000564247 COL1A1P02452 1464 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-208ENST00000564247 CFAP100Q494V2 611 aa20.4■□□□□ 0.86
CMTM3-208ENST00000564247 CYP4F22Q6NT55 531 aa20.4■□□□□ 0.86
CMTM3-208ENST00000564247 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
CMTM3-208ENST00000564247 SPDYE2BA6NHP3 402 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 SPDYE6P0CI01 402 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 ADD2P35612 726 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 HUNKP57058 714 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 GSTO1P78417 241 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 UBE3CQ15386 1083 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
CMTM3-208ENST00000564247 DZIP1Q86YF9 867 aaKnown RBP20.39■□□□□ 0.85
CMTM3-208ENST00000564247 SLF2Q8IX21 1173 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 SERPINA10Q9UK55 444 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
CMTM3-208ENST00000564247 PCDHAC2Q9Y5I4 1007 aa20.39■□□□□ 0.85
CMTM3-208ENST00000564247 MYO1BO43795 1136 aa20.38■□□□□ 0.85
CMTM3-208ENST00000564247 LDHCP07864 332 aa20.38■□□□□ 0.85
CMTM3-208ENST00000564247 PDE6AP16499 860 aa20.38■□□□□ 0.85
CMTM3-208ENST00000564247 NMIQ13287 307 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-208ENST00000564247 NAA16Q6N069 864 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-208ENST00000564247 PRMT6Q96LA8 375 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-208ENST00000564247 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
CMTM3-208ENST00000564247 MYH7P12883 1935 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 MYO5AQ9Y4I1 1855 aaKnown RBP20.37■□□□□ 0.85
CMTM3-208ENST00000564247 PAPPA2Q9BXP8 1791 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 CYP7A1P22680 504 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 PRDX5P30044 214 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 RBM5P52756 815 aaKnown RBP eCLIP20.37■□□□□ 0.85
CMTM3-208ENST00000564247 FKBP1BP68106 108 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 MECOMQ03112 1051 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 APPBP2Q92624 585 aa20.37■□□□□ 0.85
CMTM3-208ENST00000564247 MAST3O60307 1309 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 MAP2K2P36507 400 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
CMTM3-208ENST00000564247 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
CMTM3-208ENST00000564247 MAP2K1Q02750 393 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-208ENST00000564247 GRM1Q13255 1194 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 GRIK5Q16478 980 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 MCMDC2Q4G0Z9 681 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 NSUN4Q96CB9 384 aaKnown RBP20.36■□□□□ 0.85
CMTM3-208ENST00000564247 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 DOCK2Q92608 1830 aa20.36■□□□□ 0.85
CMTM3-208ENST00000564247 PRAMEF18Q5VWM3 479 aa20.35■□□□□ 0.85
CMTM3-208ENST00000564247 RGMBQ6NW40 437 aa20.35■□□□□ 0.85
CMTM3-208ENST00000564247 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
CMTM3-208ENST00000564247 FAM227BQ96M60 508 aa20.35■□□□□ 0.85
CMTM3-208ENST00000564247 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
CMTM3-208ENST00000564247 RAD50Q92878 1312 aa20.34■□□□□ 0.85
CMTM3-208ENST00000564247 CRKP46108 304 aa20.34■□□□□ 0.85
CMTM3-208ENST00000564247 NOL10Q9BSC4 688 aaKnown RBP20.34■□□□□ 0.85
CMTM3-208ENST00000564247 MRIQ9BWK5 157 aa20.34■□□□□ 0.85
CMTM3-208ENST00000564247 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
CMTM3-208ENST00000564247 A0A0D9SFI3 127 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 TCRBV5S4A2TA0A5A2 114 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 CLRN2A0PK11 232 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 SGSM2O43147 1006 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 AOC2O75106 756 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 REC8O95072 547 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 NF2P35240 595 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 CCDC102AQ96A19 550 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 AIDAQ96BJ3 306 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 PPP2R3BQ9Y5P8 575 aa20.33■□□□□ 0.85
CMTM3-208ENST00000564247 NOGQ13253 232 aa20.32■□□□□ 0.84
CMTM3-208ENST00000564247 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
CMTM3-208ENST00000564247 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
CMTM3-208ENST00000564247 TEKT1Q969V4 418 aa20.32■□□□□ 0.84
CMTM3-208ENST00000564247 VEZTQ9HBM0 779 aa20.32■□□□□ 0.84
CMTM3-208ENST00000564247 MAGEB6P1A0A0J9YX57 407 aa20.31■□□□□ 0.84
CMTM3-208ENST00000564247 FAM155AB1AL88 458 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms