RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
CCNF-203ENST00000564236 ZCCHC17Q9NP64 241 aaKnown RBP20.78■□□□□ 0.92
CCNF-203ENST00000564236 SRGAP3O43295 1099 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 SOX10P56693 466 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 DIXDC1Q155Q3 683 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 OTOP1Q7RTM1 612 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 ERO1AQ96HE7 468 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 WRNIP1Q96S55 665 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 ZNF112Q9UJU3 913 aa20.77■□□□□ 0.92
CCNF-203ENST00000564236 GAKO14976 1311 aa20.77■□□□□ 0.91
CCNF-203ENST00000564236 ADORA1P30542 326 aa20.76■□□□□ 0.91
CCNF-203ENST00000564236 FAM163AQ96GL9 167 aaPredicted RBP20.76■□□□□ 0.91
CCNF-203ENST00000564236 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
CCNF-203ENST00000564236 RFX7Q2KHR2 1363 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 MYH13Q9UKX3 1938 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 CCL15-CCL14A0A0B4J2E2 113 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 BCAR3O75815 825 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 PPIL2Q13356 520 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 CCL15Q16663 113 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 OTUD5Q96G74 571 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 FAM198AQ9UFP1 575 aa20.75■□□□□ 0.91
CCNF-203ENST00000564236 TNRC18O15417 2968 aaPredicted RBP20.74■□□□□ 0.91
CCNF-203ENST00000564236 A0A1B0GUL7 405 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 GNAI2P04899 355 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 TIMM10P62072 90 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 SP3Q02447 781 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 NFIAQ12857 509 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.74■□□□□ 0.91
CCNF-203ENST00000564236 TRIM17Q9Y577 477 aa20.74■□□□□ 0.91
CCNF-203ENST00000564236 ATRNL1Q5VV63 1379 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 CETPP11597 493 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 PPATQ06203 517 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 TFCP2Q12800 502 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
CCNF-203ENST00000564236 NOL9Q5SY16 702 aaKnown RBP20.73■□□□□ 0.91
CCNF-203ENST00000564236 FAM43AQ8N2R8 423 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 ZKSCAN4Q969J2 545 aaPredicted RBP20.73■□□□□ 0.91
CCNF-203ENST00000564236 XAGE2Q96GT9 111 aa20.73■□□□□ 0.91
CCNF-203ENST00000564236 IRF6O14896 467 aa20.72■□□□□ 0.91
CCNF-203ENST00000564236 SNAPC2Q13487 334 aa20.72■□□□□ 0.91
CCNF-203ENST00000564236 ZFYVE28Q9HCC9 887 aa20.72■□□□□ 0.91
CCNF-203ENST00000564236 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
CCNF-203ENST00000564236 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
CCNF-203ENST00000564236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.72■□□□□ 0.91
CCNF-203ENST00000564236 ENTPD3O75355 529 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 CAP1Q01518 475 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 MAP3K10Q02779 954 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 TAF1CQ15572 869 aaPredicted RBP20.71■□□□□ 0.91
CCNF-203ENST00000564236 SLF2Q8IX21 1173 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 CD99L2Q8TCZ2 262 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 USP40Q9NVE5 1235 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
CCNF-203ENST00000564236 PNMA6EA0A0J9YXQ4 647 aa20.7■□□□□ 0.9
CCNF-203ENST00000564236 INPP5BP32019 993 aa20.7■□□□□ 0.9
CCNF-203ENST00000564236 SPTY2D1Q68D10 685 aaPredicted RBP20.7■□□□□ 0.9
CCNF-203ENST00000564236 MIGA2Q7L4E1 593 aa20.7■□□□□ 0.9
CCNF-203ENST00000564236 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
CCNF-203ENST00000564236 BTBD19C9JJ37 291 aa20.69■□□□□ 0.9
CCNF-203ENST00000564236 TLR2O60603 784 aa20.69■□□□□ 0.9
CCNF-203ENST00000564236 ARID4AP29374 1257 aaPredicted RBP20.69■□□□□ 0.9
CCNF-203ENST00000564236 TCP10Q12799 353 aa20.69■□□□□ 0.9
CCNF-203ENST00000564236 ZKSCAN2Q63HK3 967 aa20.69■□□□□ 0.9
CCNF-203ENST00000564236 FRAT1Q92837 279 aaPredicted RBP20.69■□□□□ 0.9
CCNF-203ENST00000564236 ARMC5Q96C12 935 aa20.69■□□□□ 0.9
CCNF-203ENST00000564236 NPM3O75607 178 aaKnown RBP20.68■□□□□ 0.9
CCNF-203ENST00000564236 POLA2Q14181 598 aa20.68■□□□□ 0.9
CCNF-203ENST00000564236 ZFPM1Q8IX07 1006 aa20.68■□□□□ 0.9
CCNF-203ENST00000564236 TMEM57Q8N5G2 664 aa20.68■□□□□ 0.9
CCNF-203ENST00000564236 ZNF384Q8TF68 577 aa20.68■□□□□ 0.9
CCNF-203ENST00000564236 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
CCNF-203ENST00000564236 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 PHF20L1A8MW92 1017 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 WDHD1O75717 1129 aaPredicted RBP20.67■□□□□ 0.9
CCNF-203ENST00000564236 MAP4K4O95819 1239 aaPredicted RBP20.67■□□□□ 0.9
CCNF-203ENST00000564236 ARHGEF6Q15052 776 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 DZIP1Q86YF9 867 aaKnown RBP20.67■□□□□ 0.9
CCNF-203ENST00000564236 CLUAP1Q96AJ1 413 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 HMG20BQ9P0W2 317 aa20.67■□□□□ 0.9
CCNF-203ENST00000564236 RGS3P49796 1198 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 RHBDL3P58872 404 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 MOGSQ13724 837 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 SH3BP5LQ7L8J4 393 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 ANKRD23Q86SG2 305 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 ABCF2Q9UG63 623 aa20.66■□□□□ 0.9
CCNF-203ENST00000564236 MECOMQ03112 1051 aa20.65■□□□□ 0.9
CCNF-203ENST00000564236 G3BP1Q13283 466 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCNF-203ENST00000564236 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
CCNF-203ENST00000564236 SPATA5Q8NB90 893 aa20.65■□□□□ 0.9
CCNF-203ENST00000564236 CENPFP49454 3210 aa20.65■□□□□ 0.9
CCNF-203ENST00000564236 COL2A1P02458 1487 aaPredicted RBP20.64■□□□□ 0.89
CCNF-203ENST00000564236 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 CXCL11O14625 94 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 IGSF3O75054 1194 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 GNRH1P01148 92 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 BTDP43251 543 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms