RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ARAFP10398 606 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 LDLRAD1Q5T700 205 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 COL25A1Q9BXS0 654 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 KLF15Q9UIH9 416 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 MSH6P52701 1360 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 KIF15Q9NS87 1388 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 NEURL1BA8MQ27 555 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 CPB1P15086 417 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 EIF2AK2P19525 551 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 RXRBP28702 533 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 TNFRSF25Q93038 417 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 NKTRP30414 1462 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-208ENST00000563911 SPATA31A6Q5VVP1 1343 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 GSTT1P30711 240 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 FCGRTP55899 365 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 RNFT1Q5M7Z0 435 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 ZNF772Q68DY9 489 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 RASSF4Q9H2L5 321 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 SLC6A14Q9UN76 642 aa8.88□□□□□ -0.99
HERPUD1-208ENST00000563911 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 AFF2P51816 1311 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 ADH7P40394 386 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 ATP11AP98196 1134 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 C9orf131Q5VYM1 1079 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 BRINP3Q76B58 766 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 GLIS3Q8NEA6 775 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 IRF7Q92985 503 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 TCF12Q99081 682 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 PBX4Q9BYU1 374 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 KDM5AP29375 1690 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 RGS12O14924 1447 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 FGD6Q6ZV73 1430 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 ADAMTS13Q76LX8 1427 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 PTPRUQ92729 1446 aa8.87□□□□□ -0.99
HERPUD1-208ENST00000563911 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 ZNF76P36508 570 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 NFX1Q12986 1120 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 MEX3CQ5U5Q3 659 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 DTHD1Q6ZMT9 781 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 FCHSD1Q86WN1 690 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 CCNJLQ8IV13 435 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 ASAP3Q8TDY4 903 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 HHIPQ96QV1 700 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 OXCT2Q9BYC2 517 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 AKAP2Q9Y2D5 859 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 AHDC1Q5TGY3 1603 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 MYOM3Q5VTT5 1437 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
HERPUD1-208ENST00000563911 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 ADGRB3O60242 1522 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 NFKBIEO00221 500 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 SMNDC1O75940 238 aaKnown RBP eCLIP8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 ALAS2P22557 587 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 HDLBPQ00341 1268 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 CEP135Q66GS9 1140 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 TMEM102Q8N9M5 508 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 RNF34Q969K3 372 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 PLD4Q96BZ4 506 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 ABCB6Q9NP58 842 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 METTL5Q9NRN9 209 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
HERPUD1-208ENST00000563911 CDK12Q9NYV4 1490 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 ELOA3CA0A087WX78 387 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 ELOA3DA6NLF2 546 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 METTL12A8MUP2 240 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 GRIA4P48058 902 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 FANCCQ00597 558 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 ELOA3BQ3SY89 546 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 GOLGA6L1Q8N7Z2 621 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 ELOA3Q8NG57 546 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 C19orf44Q9H6X5 657 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 GDF2Q9UK05 429 aaPredicted RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 TTF2Q9UNY4 1162 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 RIMS2Q9UQ26 1411 aa8.84□□□□□ -0.99
HERPUD1-208ENST00000563911 MYO5BQ9ULV0 1848 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms