RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CPA1P15085 419 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 ALX1Q15699 326 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 STRIP1Q5VSL9 837 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 BLOC1S2Q6QNY1 142 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 RUFY3Q7L099 469 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 CERS5Q8N5B7 392 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 SDR42E1Q8WUS8 393 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 CRNKL1Q9BZJ0 848 aaKnown RBP26.1■■□□□ 1.77
LINC01960-201ENST00000563759 TAOK3Q9H2K8 898 aa26.1■■□□□ 1.77
LINC01960-201ENST00000563759 KCNQ5Q9NR82 932 aa26.1■■□□□ 1.77
LINC01960-201ENST00000563759 BAG3O95817 575 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 MCM2P49736 904 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 NEK1Q96PY6 1258 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 MXD3Q9BW11 206 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 TIAM2Q8IVF5 1701 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 FOCADQ5VW36 1801 aa26.09■■□□□ 1.77
LINC01960-201ENST00000563759 USP17L3A6NCW0 530 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 USP17L4A6NCW7 530 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 F8W031 263 aaPredicted RBP26.08■■□□□ 1.77
LINC01960-201ENST00000563759 USP17L1Q7RTZ2 530 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 VPS33BQ9H267 617 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 COL4A5P29400 1685 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 E7EWF7 191 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 STOX1Q6ZVD7 989 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 PDRG1Q9NUG6 133 aa26.08■■□□□ 1.77
LINC01960-201ENST00000563759 TTF2Q9UNY4 1162 aaKnown RBP26.08■■□□□ 1.77
LINC01960-201ENST00000563759 NOL8Q76FK4 1167 aaKnown RBP26.07■■□□□ 1.76
LINC01960-201ENST00000563759 TTC14Q96N46 770 aa26.07■■□□□ 1.76
LINC01960-201ENST00000563759 ECM29Q5VYK3 1845 aa26.07■■□□□ 1.76
LINC01960-201ENST00000563759 IARSP41252 1262 aaKnown RBP26.06■■□□□ 1.76
LINC01960-201ENST00000563759 BTDP43251 543 aa26.06■■□□□ 1.76
LINC01960-201ENST00000563759 DACT2Q5SW24 774 aa26.06■■□□□ 1.76
LINC01960-201ENST00000563759 CERS3Q8IU89 383 aa26.06■■□□□ 1.76
LINC01960-201ENST00000563759 HSP90AA1P07900 732 aaKnown RBP26.06■■□□□ 1.76
LINC01960-201ENST00000563759 HMGB1P09429 215 aaKnown RBP26.06■■□□□ 1.76
LINC01960-201ENST00000563759 RPS6KB1P23443 525 aa26.06■■□□□ 1.76
LINC01960-201ENST00000563759 FKBP1AP62942 108 aaKnown RBP26.06■■□□□ 1.76
LINC01960-201ENST00000563759 YDJCA8MPS7 323 aa26.05■■□□□ 1.76
LINC01960-201ENST00000563759 GAKO14976 1311 aa26.05■■□□□ 1.76
LINC01960-201ENST00000563759 AK2P54819 239 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 NIM1KQ8IY84 436 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 SPRYD3Q8NCJ5 442 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 FAM163AQ96GL9 167 aaPredicted RBP26.04■■□□□ 1.76
LINC01960-201ENST00000563759 FHDC1Q9C0D6 1143 aaPredicted RBP26.04■■□□□ 1.76
LINC01960-201ENST00000563759 PPP4CP60510 307 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 GIMAP6Q6P9H5 292 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 SH3RF3Q8TEJ3 882 aaPredicted RBP26.04■■□□□ 1.76
LINC01960-201ENST00000563759 MYH1P12882 1939 aa26.04■■□□□ 1.76
LINC01960-201ENST00000563759 GPR75-ASB3A0A0A6YYF3 556 aa26.03■■□□□ 1.76
LINC01960-201ENST00000563759 NFKBIEO00221 500 aa26.03■■□□□ 1.76
LINC01960-201ENST00000563759 COL9A3Q14050 684 aaPredicted RBP26.03■■□□□ 1.76
LINC01960-201ENST00000563759 TCEANC2Q96MN5 208 aa26.03■■□□□ 1.76
LINC01960-201ENST00000563759 DAGLAQ9Y4D2 1042 aa26.03■■□□□ 1.76
LINC01960-201ENST00000563759 PLCG2P16885 1265 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 SCNN1DP51172 638 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 RALYLQ86SE5 291 aaKnown RBP26.02■■□□□ 1.76
LINC01960-201ENST00000563759 TBC1D10CQ8IV04 446 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 KIAA0825Q8IV33 1275 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 NBPF3Q9H094 633 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 ATP8A2Q9NTI2 1148 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 USP5P45974 858 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 TRDNQ13061 729 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 TEKT1Q969V4 418 aa26.02■■□□□ 1.76
LINC01960-201ENST00000563759 DDX60LQ5H9U9 1706 aaKnown RBP26.01■■□□□ 1.75
LINC01960-201ENST00000563759 NCOA7Q8NI08 942 aa26.01■■□□□ 1.75
LINC01960-201ENST00000563759 DCP1AQ9NPI6 582 aaPredicted RBP26.01■■□□□ 1.75
LINC01960-201ENST00000563759 LTBP3Q9NS15 1303 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 MINDY4BA8MYZ0 360 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 CTDSPL2Q05D32 466 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 DHX32Q7L7V1 743 aaKnown RBP26■■□□□ 1.75
LINC01960-201ENST00000563759 ZNRF3Q9ULT6 936 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 PPARAQ07869 468 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 ANKRD1Q15327 319 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 JDP2Q8WYK2 163 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 TMX3Q96JJ7 454 aa26■■□□□ 1.75
LINC01960-201ENST00000563759 SLKQ9H2G2 1235 aaPredicted RBP26■■□□□ 1.75
LINC01960-201ENST00000563759 MYO3BQ8WXR4 1341 aa25.99■■□□□ 1.75
LINC01960-201ENST00000563759 RAD17O75943 681 aa25.99■■□□□ 1.75
LINC01960-201ENST00000563759 FGD1P98174 961 aa25.99■■□□□ 1.75
LINC01960-201ENST00000563759 TEX11Q8IYF3 940 aa25.99■■□□□ 1.75
LINC01960-201ENST00000563759 ARPP21Q9UBL0 812 aaPredicted RBP25.99■■□□□ 1.75
LINC01960-201ENST00000563759 HHIPL2Q6UWX4 724 aa25.98■■□□□ 1.75
LINC01960-201ENST00000563759 LIMCH1Q9UPQ0 1083 aa25.98■■□□□ 1.75
LINC01960-201ENST00000563759 RASSF7Q02833 373 aa25.98■■□□□ 1.75
LINC01960-201ENST00000563759 TGFBRAP1Q8WUH2 860 aa25.98■■□□□ 1.75
LINC01960-201ENST00000563759 NEDD4P46934 1319 aa25.97■■□□□ 1.75
LINC01960-201ENST00000563759 CRKP46108 304 aa25.97■■□□□ 1.75
LINC01960-201ENST00000563759 AKNAD1Q5T1N1 836 aa25.97■■□□□ 1.75
LINC01960-201ENST00000563759 LARP6Q9BRS8 491 aaKnown RBP25.97■■□□□ 1.75
LINC01960-201ENST00000563759 MCM9Q9NXL9 1143 aa25.97■■□□□ 1.75
LINC01960-201ENST00000563759 DICER1Q9UPY3 1922 aaKnown RBP25.97■■□□□ 1.75
LINC01960-201ENST00000563759 USP17L12C9JPN9 530 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 USP17L21D6R901 530 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 PSMD14O00487 310 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 MCM5P33992 734 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 CTR9Q6PD62 1173 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 MFSD6Q6ZSS7 791 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 MB21D2Q8IYB1 491 aaPredicted RBP25.96■■□□□ 1.75
LINC01960-201ENST00000563759 STAG1Q8WVM7 1258 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 ALDH8A1Q9H2A2 487 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms