RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZBTB43O43298 467 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
ABCA3-203ENST00000563623 APPBP2Q92624 585 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 JCADQ9P266 1359 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 CCDC12Q8WUD4 166 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 H7C1W4 665 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NCAPHQ15003 741 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 LONRF3Q496Y0 759 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 ANGEL1Q9UNK9 670 aaKnown RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 ZFYP08048 801 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 STX17P56962 302 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 AXDND1Q5T1B0 1012 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
ABCA3-203ENST00000563623 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 SALL1Q9NSC2 1324 aa13.57□□□□□ -0.24
ABCA3-203ENST00000563623 UBE2Q2LH0YL09 131 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 ANTXR2P58335 489 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 GRAMD1CQ8IYS0 662 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 CMTR1Q8N1G2 835 aaKnown RBP13.56□□□□□ -0.24
ABCA3-203ENST00000563623 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-203ENST00000563623 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 CALCOCO1Q9P1Z2 691 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 KCNJ14Q9UNX9 436 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 SLIT1O75093 1534 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 LTN1O94822 1766 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 RGPD2P0DJD1 1756 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-203ENST00000563623 TOM1L2Q6ZVM7 507 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 MB21D2Q8IYB1 491 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-203ENST00000563623 PUF60Q9UHX1 559 aaKnown RBP13.56□□□□□ -0.24
ABCA3-203ENST00000563623 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
ABCA3-203ENST00000563623 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
ABCA3-203ENST00000563623 AFMP43652 599 aa13.55□□□□□ -0.24
ABCA3-203ENST00000563623 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
ABCA3-203ENST00000563623 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
ABCA3-203ENST00000563623 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
ABCA3-203ENST00000563623 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
ABCA3-203ENST00000563623 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
ABCA3-203ENST00000563623 L2HGDHQ9H9P8 463 aa13.55□□□□□ -0.24
ABCA3-203ENST00000563623 IKBKBO14920 756 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 PPFIBP1Q86W92 1011 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 CASP7P55210 303 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 CYB5R4Q7L1T6 521 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 NAPBQ9H115 298 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 ATF3P18847 181 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 CDC27P30260 824 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 GPS2Q13227 327 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 BPIFA3Q9BQP9 254 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
ABCA3-203ENST00000563623 ARHGAP6O43182 974 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 H2AFXP16104 143 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 GYS2P54840 703 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 WDR24Q96S15 920 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 PDE4BQ07343 736 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 MCM6Q14566 821 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 KDM6AO15550 1401 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
ABCA3-203ENST00000563623 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
ABCA3-203ENST00000563623 ZMYM6O95789 1325 aa13.52□□□□□ -0.24
ABCA3-203ENST00000563623 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.24
ABCA3-203ENST00000563623 CUTAO60888 179 aa13.52□□□□□ -0.24
ABCA3-203ENST00000563623 KIF6Q6ZMV9 814 aa13.52□□□□□ -0.24
ABCA3-203ENST00000563623 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms