RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
CCDC187-201ENST00000563590 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
CCDC187-201ENST00000563590 CLIC4Q9Y696 253 aa14.58□□□□□ -0.08
CCDC187-201ENST00000563590 PFKFB2O60825 505 aa14.58□□□□□ -0.08
CCDC187-201ENST00000563590 FMR1NBQ8N0W7 255 aaPredicted RBP14.58□□□□□ -0.08
CCDC187-201ENST00000563590 GPR161Q8N6U8 529 aaKnown RBP14.58□□□□□ -0.08
CCDC187-201ENST00000563590 C1orf167Q5SNV9 1468 aa14.58□□□□□ -0.08
CCDC187-201ENST00000563590 SYKP43405 635 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 ILDR1Q86SU0 546 aaPredicted RBP14.57□□□□□ -0.08
CCDC187-201ENST00000563590 CEMIPQ8WUJ3 1361 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 KIF5CO60282 957 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 CENPHQ9H3R5 247 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 FANCLQ9NW38 375 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 JCADQ9P266 1359 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 PNOCQ13519 176 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 PPFIBP1Q86W92 1011 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 IFNL2Q8IZJ0 200 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 FAM89AQ96GI7 184 aa14.57□□□□□ -0.08
CCDC187-201ENST00000563590 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
CCDC187-201ENST00000563590 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 LIG3P49916 1009 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 HDAC5Q9UQL6 1122 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 H3BQF6 201 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 CNNM3Q8NE01 707 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 SMARCC1Q92922 1105 aaPredicted RBP14.56□□□□□ -0.08
CCDC187-201ENST00000563590 ACBD3Q9H3P7 528 aa14.56□□□□□ -0.08
CCDC187-201ENST00000563590 DBNLQ9UJU6 430 aaKnown RBP14.56□□□□□ -0.08
CCDC187-201ENST00000563590 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 RGS22Q8NE09 1264 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 LINS1Q8NG48 757 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 CNNM1Q9NRU3 951 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 ZRANB2O95218 330 aaKnown RBP eCLIP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 STX17P56962 302 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 ZNF609O15014 1411 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 A0A0G2JLW4 131 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 EIF3CLB5ME19 914 aaKnown RBP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 SNAP23O00161 211 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 TOGARAM2Q6ZUX3 1019 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 HDXQ7Z353 690 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 CAGE1Q8TC20 777 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 EIF3CQ99613 913 aaKnown RBP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
CCDC187-201ENST00000563590 TOPAZ1Q8N9V7 1692 aa14.55□□□□□ -0.08
CCDC187-201ENST00000563590 GOLGA8BA8MQT2 603 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 FANCGO15287 622 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 TFRCP02786 760 aaKnown RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 MYL5Q02045 173 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 TTC19Q6DKK2 380 aaPredicted RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 DHX32Q7L7V1 743 aaKnown RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 SYNE4Q8N205 404 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 CCDC57Q2TAC2 916 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 RALYLQ86SE5 291 aaKnown RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 CCDC24Q8N4L8 307 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 ZCRB1Q8TBF4 217 aaKnown RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 HOOK1Q9UJC3 728 aaKnown RBP14.54□□□□□ -0.08
CCDC187-201ENST00000563590 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
CCDC187-201ENST00000563590 NLRP12P59046 1061 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 MCMDC2Q4G0Z9 681 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 ADALQ6DHV7 355 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 EXOC4Q96A65 974 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 MPHOSPH8Q99549 860 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 ZMYND10O75800 440 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 MTF1Q14872 753 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 CAPZA3Q96KX2 299 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 SPATA31A3Q5VYP0 1347 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 PFKFB1P16118 471 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 SLC20A2Q08357 652 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 NCAPHQ15003 741 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 TRIM65Q6PJ69 517 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 SECISBP2LQ93073 1101 aaKnown RBP14.53□□□□□ -0.08
CCDC187-201ENST00000563590 FAM204AQ9H8W3 233 aa14.53□□□□□ -0.08
CCDC187-201ENST00000563590 ARHGAP6O43182 974 aa14.52□□□□□ -0.08
CCDC187-201ENST00000563590 ATP5JP18859 108 aa14.52□□□□□ -0.08
CCDC187-201ENST00000563590 TXLNAP40222 546 aa14.52□□□□□ -0.08
CCDC187-201ENST00000563590 PUS3Q9BZE2 481 aaKnown RBP14.52□□□□□ -0.08
CCDC187-201ENST00000563590 ABCB6Q9NP58 842 aa14.52□□□□□ -0.08
CCDC187-201ENST00000563590 IGKV5-2P06315 115 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 TRIM29Q14134 588 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 ATL3Q6DD88 541 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 LINC00301Q8NCQ3 95 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.09
CCDC187-201ENST00000563590 CRACR2AQ9BSW2 395 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 KLF18A0A0U1RQI7 1052 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 KCNG4Q8TDN1 519 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 NUP133Q8WUM0 1156 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
CCDC187-201ENST00000563590 CLIC6Q96NY7 704 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms