RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 UNCXA6NJT0 531 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 CYP2E1P05181 493 aaPredicted RBP18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 NF2P35240 595 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 RHBDL3P58872 404 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 MECOMQ03112 1051 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 CLMNQ96JQ2 1002 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 PRDM10Q9NQV6 1147 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 ANGEL1Q9UNK9 670 aaKnown RBP18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 MROH7-TTC4A0A0A0MT08 1334 aa18.21■□□□□ 0.51
RPUSD1-204ENST00000563560 AK9Q5TCS8 1911 aa18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 CTCFP49711 727 aaPredicted RBP18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 PRKG1Q13976 671 aa18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
RPUSD1-204ENST00000563560 PHIPQ8WWQ0 1821 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 GPR75-ASB3A0A0A6YYF3 556 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 GJA5P36382 358 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 ERC1Q8IUD2 1116 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
RPUSD1-204ENST00000563560 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 WDHD1O75717 1129 aaPredicted RBP18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 LBX1P52954 281 aa18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 SH3BP5LQ7L8J4 393 aa18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
RPUSD1-204ENST00000563560 MYH7P12883 1935 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 HMMRO75330 724 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 ZAP70P43403 619 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 TM4SF4P48230 202 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 TNNI2P48788 182 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 DDX60LQ5H9U9 1706 aaKnown RBP18.17■□□□□ 0.5
RPUSD1-204ENST00000563560 COL2A1P02458 1487 aaPredicted RBP18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 CA12O43570 354 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 DZIP1Q86YF9 867 aaKnown RBP18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 AIDAQ96BJ3 306 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 WNK4Q96J92 1243 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 USP40Q9NVE5 1235 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 SAGE1Q9NXZ1 904 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 TSKSQ9UJT2 592 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 ZNF112Q9UJU3 913 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
RPUSD1-204ENST00000563560 PTPRFP10586 1907 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 IGSF3O75054 1194 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 RAB11FIP3O75154 756 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 BTDP43251 543 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 AACSQ86V21 672 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 REM2Q8IYK8 340 aaPredicted RBP18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 ANKRD13AQ8IZ07 590 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 NDUFB9Q9Y6M9 179 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 HTTP42858 3142 aa18.15■□□□□ 0.5
RPUSD1-204ENST00000563560 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 ENTPD3O75355 529 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 ZBTB48P10074 688 aaPredicted RBP18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 IREB2P48200 963 aaKnown RBP18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 RGS3P49796 1198 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 VGLL4Q14135 290 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 TMOD2Q9NZR1 351 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 ATAD5Q96QE3 1844 aa18.14■□□□□ 0.49
RPUSD1-204ENST00000563560 TCP10Q12799 353 aa18.13■□□□□ 0.49
RPUSD1-204ENST00000563560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
RPUSD1-204ENST00000563560 CFHR5Q9BXR6 569 aa18.13■□□□□ 0.49
RPUSD1-204ENST00000563560 MYH1P12882 1939 aa18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 TESPA1A2RU30 521 aaPredicted RBP18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 DDTLA6NHG4 134 aaPredicted RBP18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 PPP4CP60510 307 aa18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 MS4A4AQ96JQ5 239 aa18.12■□□□□ 0.49
RPUSD1-204ENST00000563560 PHF20L1A8MW92 1017 aa18.11■□□□□ 0.49
RPUSD1-204ENST00000563560 MAP4K4O95819 1239 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms