RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 FAM43AQ8N2R8 423 aa26.1■■□□□ 1.77
CHD9-208ENST00000563410 PTPN22Q9Y2R2 807 aa26.1■■□□□ 1.77
CHD9-208ENST00000563410 INTS3Q68E01 1043 aaKnown RBP26.09■■□□□ 1.77
CHD9-208ENST00000563410 CDC42EP5Q6NZY7 148 aa26.09■■□□□ 1.77
CHD9-208ENST00000563410 FAM151AQ8WW52 585 aa26.09■■□□□ 1.77
CHD9-208ENST00000563410 HOOK2Q96ED9 719 aa26.09■■□□□ 1.77
CHD9-208ENST00000563410 HDAC5Q9UQL6 1122 aa26.09■■□□□ 1.77
CHD9-208ENST00000563410 RBBP6Q7Z6E9 1792 aaKnown RBP26.09■■□□□ 1.77
CHD9-208ENST00000563410 SALL1Q9NSC2 1324 aa26.09■■□□□ 1.77
CHD9-208ENST00000563410 SLC34A2O95436 690 aa26.08■■□□□ 1.77
CHD9-208ENST00000563410 TAF1CQ15572 869 aaPredicted RBP26.08■■□□□ 1.77
CHD9-208ENST00000563410 ERO1BQ86YB8 467 aa26.08■■□□□ 1.77
CHD9-208ENST00000563410 ARHGAP45Q92619 1136 aa26.08■■□□□ 1.77
CHD9-208ENST00000563410 GNL3LQ9NVN8 582 aaKnown RBP26.08■■□□□ 1.77
CHD9-208ENST00000563410 ZBTB22O15209 634 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 LDHBP07195 334 aaKnown RBP26.07■■□□□ 1.76
CHD9-208ENST00000563410 ADORA1P30542 326 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 NFIAQ12857 509 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 DCAF15Q66K64 600 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 MIGA2Q7L4E1 593 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 EFCC1Q9HA90 598 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 DENND2AQ9ULE3 1009 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 BRCA2P51587 3418 aa26.07■■□□□ 1.76
CHD9-208ENST00000563410 IRF6O14896 467 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 SEMA3EO15041 775 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 CCDC102BQ68D86 513 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 ZNF341Q9BYN7 854 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 ZFYVE28Q9HCC9 887 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 ZSWIM8A7E2V4 1837 aa26.06■■□□□ 1.76
CHD9-208ENST00000563410 INPP5BP32019 993 aa26.05■■□□□ 1.76
CHD9-208ENST00000563410 TCP10Q12799 353 aa26.05■■□□□ 1.76
CHD9-208ENST00000563410 FAM198AQ9UFP1 575 aa26.05■■□□□ 1.76
CHD9-208ENST00000563410 DOCK2Q92608 1830 aa26.04■■□□□ 1.76
CHD9-208ENST00000563410 CETPP11597 493 aa26.04■■□□□ 1.76
CHD9-208ENST00000563410 PPIL2Q13356 520 aa26.04■■□□□ 1.76
CHD9-208ENST00000563410 ZNF112Q9UJU3 913 aa26.04■■□□□ 1.76
CHD9-208ENST00000563410 MKI67P46013 3256 aaKnown RBP26.04■■□□□ 1.76
CHD9-208ENST00000563410 BTBD19C9JJ37 291 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 GNAI3P08754 354 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 TIMM10P62072 90 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 SNAPC2Q13487 334 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 MTX1Q13505 466 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 USP40Q9NVE5 1235 aa26.03■■□□□ 1.76
CHD9-208ENST00000563410 PPATQ06203 517 aa26.02■■□□□ 1.76
CHD9-208ENST00000563410 RASGRF1Q13972 1273 aa26.02■■□□□ 1.76
CHD9-208ENST00000563410 ZCCHC17Q9NP64 241 aaKnown RBP26.02■■□□□ 1.76
CHD9-208ENST00000563410 TNNQ9UQP3 1299 aa26.02■■□□□ 1.76
CHD9-208ENST00000563410 POTEFA5A3E0 1075 aa26.01■■□□□ 1.75
CHD9-208ENST00000563410 SRGAP3O43295 1099 aa26.01■■□□□ 1.75
CHD9-208ENST00000563410 ZFPM1Q8IX07 1006 aa26.01■■□□□ 1.75
CHD9-208ENST00000563410 ARMC5Q96C12 935 aa26.01■■□□□ 1.75
CHD9-208ENST00000563410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.01■■□□□ 1.75
CHD9-208ENST00000563410 GAKO14976 1311 aa26■■□□□ 1.75
CHD9-208ENST00000563410 TLR2O60603 784 aa26■■□□□ 1.75
CHD9-208ENST00000563410 TFCP2Q12800 502 aa26■■□□□ 1.75
CHD9-208ENST00000563410 PRPF38BQ5VTL8 546 aaKnown RBP26■■□□□ 1.75
CHD9-208ENST00000563410 PDS5AQ29RF7 1337 aaKnown RBP25.99■■□□□ 1.75
CHD9-208ENST00000563410 A0A1B0GUL7 405 aa25.99■■□□□ 1.75
CHD9-208ENST00000563410 TRIM27P14373 513 aa25.99■■□□□ 1.75
CHD9-208ENST00000563410 ZGPATQ8N5A5 531 aaKnown RBP25.99■■□□□ 1.75
CHD9-208ENST00000563410 RFX7Q2KHR2 1363 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 ATRNL1Q5VV63 1379 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 BCAR3O75815 825 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 NOL9Q5SY16 702 aaKnown RBP25.98■■□□□ 1.75
CHD9-208ENST00000563410 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.98■■□□□ 1.75
CHD9-208ENST00000563410 XAGE2Q96GT9 111 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 IDI2Q9BXS1 227 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 KCNH4Q9UQ05 1017 aa25.98■■□□□ 1.75
CHD9-208ENST00000563410 AKAP2Q9Y2D5 859 aa25.97■■□□□ 1.75
CHD9-208ENST00000563410 IPO8O15397 1037 aaKnown RBP25.96■■□□□ 1.75
CHD9-208ENST00000563410 RGS3P49796 1198 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 MOGSQ13724 837 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 ATF7IPQ6VMQ6 1270 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 FAM163AQ96GL9 167 aaPredicted RBP25.96■■□□□ 1.75
CHD9-208ENST00000563410 ARHGAP39Q9C0H5 1083 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 ABCF2Q9UG63 623 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 PTCH2Q9Y6C5 1203 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 PTPRFP10586 1907 aa25.96■■□□□ 1.75
CHD9-208ENST00000563410 WDHD1O75717 1129 aaPredicted RBP25.95■■□□□ 1.74
CHD9-208ENST00000563410 ARHGEF6Q15052 776 aa25.95■■□□□ 1.74
CHD9-208ENST00000563410 SH3BP5LQ7L8J4 393 aa25.95■■□□□ 1.74
CHD9-208ENST00000563410 PHIPQ8WWQ0 1821 aa25.95■■□□□ 1.74
CHD9-208ENST00000563410 ENTPD3O75355 529 aa25.94■■□□□ 1.74
CHD9-208ENST00000563410 LACTBP83111 547 aaPredicted RBP25.94■■□□□ 1.74
CHD9-208ENST00000563410 MVPQ14764 893 aaKnown RBP25.94■■□□□ 1.74
CHD9-208ENST00000563410 ANKRD23Q86SG2 305 aa25.94■■□□□ 1.74
CHD9-208ENST00000563410 DZIP1Q86YF9 867 aaKnown RBP25.94■■□□□ 1.74
CHD9-208ENST00000563410 FRAT1Q92837 279 aaPredicted RBP25.94■■□□□ 1.74
CHD9-208ENST00000563410 ZNF333Q96JL9 665 aa25.94■■□□□ 1.74
CHD9-208ENST00000563410 PNMA6EA0A0J9YXQ4 647 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 PHF20L1A8MW92 1017 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 GNAI2P04899 355 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 C17orf99Q6UX52 265 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 ZNF384Q8TF68 577 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 CLUAP1Q96AJ1 413 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 DDX4Q9NQI0 724 aaKnown RBP25.93■■□□□ 1.74
CHD9-208ENST00000563410 DOCK1Q14185 1865 aa25.93■■□□□ 1.74
CHD9-208ENST00000563410 BTDP43251 543 aa25.92■■□□□ 1.74
CHD9-208ENST00000563410 SPTY2D1Q68D10 685 aaPredicted RBP25.92■■□□□ 1.74
CHD9-208ENST00000563410 SLF2Q8IX21 1173 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms