RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 EMILIN3Q9NT22 766 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 RAB11FIP3O75154 756 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 MAP3K9P80192 1104 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 RASGRF1Q13972 1273 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 GRIK5Q16478 980 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 MAP1SQ66K74 1059 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 CNTROBQ8N137 903 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 MTMR14Q8NCE2 650 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 KIF1BPQ96EK5 621 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 NEUROD6Q96NK8 337 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 DCTPP1Q9H773 170 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 GNL3LQ9NVN8 582 aaKnown RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 DBNLQ9UJU6 430 aaKnown RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 DENND2AQ9ULE3 1009 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 SUGT1Q9Y2Z0 365 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 SALL1Q9NSC2 1324 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 WNT10BO00744 389 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 FRAT2O75474 233 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-204ENST00000563130 HSPA6P17066 643 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 WDR66Q8TBY9 1149 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 ZNF512BQ96KM6 892 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-204ENST00000563130 DBNDD2Q9BQY9 259 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 MRIQ9BWK5 157 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 CHAF1AQ13111 956 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-204ENST00000563130 NBPF9Q3BBW0 867 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 RBM26Q5T8P6 1007 aaKnown RBP7.61□□□□□ -1.19
CNOT1-204ENST00000563130 TLR7Q9NYK1 1049 aaKnown RBP7.61□□□□□ -1.19
CNOT1-204ENST00000563130 HDAC9Q9UKV0 1011 aa7.61□□□□□ -1.19
CNOT1-204ENST00000563130 ASTN2O75129 1339 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-204ENST00000563130 F8W031 263 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-204ENST00000563130 HDLBPQ00341 1268 aaKnown RBP7.6□□□□□ -1.19
CNOT1-204ENST00000563130 SCARF1Q14162 830 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 CDC37L1Q7L3B6 337 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 EXOC6Q8TAG9 804 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 IL1RAPL2Q9NP60 686 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 HMG20BQ9P0W2 317 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
CNOT1-204ENST00000563130 PITPNM2Q9BZ72 1349 aa7.6□□□□□ -1.19
CNOT1-204ENST00000563130 UQCRFS1P1P0C7P4 283 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 MCAMP43121 646 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 EMP3P54852 163 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 HDAC1Q13547 482 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 CLASRPQ8N2M8 674 aaKnown RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 SPATA5Q8NB90 893 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 PRMT6Q96LA8 375 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 CCDC8Q9H0W5 538 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 GGA3Q9NZ52 723 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 ARIH1Q9Y4X5 557 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 PRDX5P30044 214 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 APLP1P51693 650 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 DLGAP5Q15398 846 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 CCDC158Q5M9N0 1113 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 GORABQ5T7V8 394 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 ANGEL2Q5VTE6 544 aaKnown RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 AACSQ86V21 672 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.192e-7■■■■□ 26.6
CNOT1-204ENST00000563130 GLIS2Q9BZE0 524 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-204ENST00000563130 LRRCC1Q9C099 1032 aa7.59□□□□□ -1.19
CNOT1-204ENST00000563130 MYH13Q9UKX3 1938 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 NUDT7P0C024 238 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 CRKP46108 304 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
CNOT1-204ENST00000563130 HHIPL2Q6UWX4 724 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 ZGPATQ8N5A5 531 aaKnown RBP7.58□□□□□ -1.2
CNOT1-204ENST00000563130 MARVELD3Q96A59 401 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 DCPSQ96C86 337 aaKnown RBP7.58□□□□□ -1.2
CNOT1-204ENST00000563130 ZDHHC15Q96MV8 337 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 MAST3O60307 1309 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 AOX1Q06278 1338 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 AKAP11Q9UKA4 1901 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 APBB1O00213 710 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 TRAF5O00463 557 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 TTC39AQ5SRH9 613 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 APOBEC3HQ6NTF7 200 aaKnown RBP7.58□□□□□ -1.2
CNOT1-204ENST00000563130 KRT26Q7Z3Y9 468 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 TEKT1Q969V4 418 aa7.58□□□□□ -1.2
CNOT1-204ENST00000563130 DPYSL4O14531 572 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 IGSF3O75054 1194 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 CYP2E1P05181 493 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 CST9Q5W186 159 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 DLK2Q6UY11 383 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 USP48Q86UV5 1035 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 ZNF384Q8TF68 577 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 GAKO14976 1311 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 SPDYE16A6NNV3 312 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 EVI5O60447 810 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 IFIT2P09913 472 aaKnown RBP7.57□□□□□ -1.2
CNOT1-204ENST00000563130 DIXDC1Q155Q3 683 aa7.57□□□□□ -1.2
CNOT1-204ENST00000563130 SPTY2D1Q68D10 685 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms