RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 DNAAF4Q8WXU2 420 aa10.62□□□□□ -0.71
CKLF-208ENST00000563092 TMEM39BQ9GZU3 492 aa10.62□□□□□ -0.71
CKLF-208ENST00000563092 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
CKLF-208ENST00000563092 ZSWIM8A7E2V4 1837 aa10.62□□□□□ -0.71
CKLF-208ENST00000563092 GJA8P48165 433 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 RBM5P52756 815 aaKnown RBP eCLIP10.61□□□□□ -0.71
CKLF-208ENST00000563092 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
CKLF-208ENST00000563092 MTFR1Q15390 333 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
CKLF-208ENST00000563092 EPHA10Q5JZY3 1008 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
CKLF-208ENST00000563092 FAM84BQ96KN1 310 aaPredicted RBP10.61□□□□□ -0.71
CKLF-208ENST00000563092 MRIQ9BWK5 157 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 SRRDQ9UH36 339 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
CKLF-208ENST00000563092 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 CSADQ9Y600 493 aa10.61□□□□□ -0.71
CKLF-208ENST00000563092 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 IRF6O14896 467 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 GJB1P08034 283 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 CRKP46108 304 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 PPIL2Q13356 520 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 UBE4AQ14139 1066 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 GRIK5Q16478 980 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 BEND3Q5T5X7 828 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 FKBP1CQ5VVH2 108 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 FAM83AQ86UY5 434 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 TRIM47Q96LD4 638 aa10.6□□□□□ -0.71
CKLF-208ENST00000563092 PRKRIP1Q9H875 184 aaPredicted RBP10.6□□□□□ -0.71
CKLF-208ENST00000563092 RPAP1Q9BWH6 1393 aaPredicted RBP10.6□□□□□ -0.71
CKLF-208ENST00000563092 IL16Q14005 1332 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 A0A1W2PPC1 479 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 HIBADHP31937 336 aaKnown RBP10.59□□□□□ -0.71
CKLF-208ENST00000563092 TNNI2P48788 182 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 SNAPC2Q13487 334 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 MOGSQ13724 837 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 KIF22Q14807 665 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 LDHAL6AQ6ZMR3 332 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
CKLF-208ENST00000563092 ZNF594Q96JF6 807 aaPredicted RBP10.59□□□□□ -0.71
CKLF-208ENST00000563092 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 WDHD1O75717 1129 aaPredicted RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 OSBPP22059 807 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 GRK4P32298 578 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 GYG1P46976 350 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 PPATQ06203 517 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 ZKSCAN4Q969J2 545 aaPredicted RBP10.58□□□□□ -0.72
CKLF-208ENST00000563092 ZDHHC15Q96MV8 337 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 WRNIP1Q96S55 665 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 ZNF112Q9UJU3 913 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 PCDHB8Q9UN66 801 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
CKLF-208ENST00000563092 DLL1O00548 723 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 VAMP4O75379 141 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 CCL5P13501 91 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 CAPN2P17655 700 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 PSMC4P43686 418 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 APOBEC3HQ6NTF7 200 aaKnown RBP10.57□□□□□ -0.72
CKLF-208ENST00000563092 DPF3Q92784 378 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 HOOK2Q96ED9 719 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 HTATIP2Q9BUP3 242 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 RIPOR2Q9Y4F9 1068 aa10.57□□□□□ -0.72
CKLF-208ENST00000563092 GRM8O00222 908 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 BCRP11274 1271 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 HOXD10P28358 340 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 CACNB3P54284 484 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 TBC1D22AQ8WUA7 517 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 KAZALD1Q96I82 304 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 CNNM1Q9NRU3 951 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 CPA4Q9UI42 421 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
CKLF-208ENST00000563092 F6X3S4 739 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 PDHXO00330 501 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
CKLF-208ENST00000563092 PLIN1O60240 522 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 ST18O60284 1047 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 NOL9Q5SY16 702 aaKnown RBP10.55□□□□□ -0.72
CKLF-208ENST00000563092 GPAT2Q6NUI2 795 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 VGLL2Q8N8G2 317 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.55□□□□□ -0.72
CKLF-208ENST00000563092 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 U2AF1L4Q8WU68 220 aaKnown RBP10.55□□□□□ -0.72
CKLF-208ENST00000563092 TEKT1Q969V4 418 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
CKLF-208ENST00000563092 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 UTYO14607 1347 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 MROH5Q6ZUA9 1318 aa10.55□□□□□ -0.72
CKLF-208ENST00000563092 MYPNQ86TC9 1320 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms