RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ERC1Q8IUD2 1116 aa20.39■□□□□ 0.85
CDT1-202ENST00000562747 SERPINA10Q9UK55 444 aa20.39■□□□□ 0.85
CDT1-202ENST00000562747 MYO1BO43795 1136 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 USP2O75604 605 aaPredicted RBP20.38■□□□□ 0.85
CDT1-202ENST00000562747 CAP1Q01518 475 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 RASA3Q14644 834 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 TNNI3KQ59H18 835 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 CDAN1Q8IWY9 1227 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 SIRT2Q8IXJ6 389 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 FPGT-TNNI3KV9GXZ4 949 aa20.38■□□□□ 0.85
CDT1-202ENST00000562747 PDS5AQ29RF7 1337 aaKnown RBP20.37■□□□□ 0.85
CDT1-202ENST00000562747 RBM5P52756 815 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDT1-202ENST00000562747 INHBEP58166 350 aa20.37■□□□□ 0.85
CDT1-202ENST00000562747 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
CDT1-202ENST00000562747 PCDH10Q9P2E7 1040 aa20.37■□□□□ 0.85
CDT1-202ENST00000562747 MAST3O60307 1309 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 CRHR2Q13324 411 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 SUPT20HL1Q3ZLR7 823 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 SPDYE2Q495Y8 402 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 GORABQ5T7V8 394 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 PTPN18Q99952 460 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 MRIQ9BWK5 157 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
CDT1-202ENST00000562747 POTEFA5A3E0 1075 aa20.35■□□□□ 0.85
CDT1-202ENST00000562747 IREB2P48200 963 aaKnown RBP20.35■□□□□ 0.85
CDT1-202ENST00000562747 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
CDT1-202ENST00000562747 GRIK5Q16478 980 aa20.35■□□□□ 0.85
CDT1-202ENST00000562747 CD99L2Q8TCZ2 262 aa20.35■□□□□ 0.85
CDT1-202ENST00000562747 ZNF70Q9UC06 446 aaPredicted RBP20.35■□□□□ 0.85
CDT1-202ENST00000562747 UNCXA6NJT0 531 aa20.34■□□□□ 0.85
CDT1-202ENST00000562747 ARID4AP29374 1257 aaPredicted RBP20.34■□□□□ 0.85
CDT1-202ENST00000562747 CRKP46108 304 aa20.34■□□□□ 0.85
CDT1-202ENST00000562747 ZGPATQ8N5A5 531 aaKnown RBP20.34■□□□□ 0.85
CDT1-202ENST00000562747 TEPSINQ96N21 525 aa20.34■□□□□ 0.85
CDT1-202ENST00000562747 TDRD3Q9H7E2 651 aaKnown RBP20.34■□□□□ 0.85
CDT1-202ENST00000562747 UQCRFS1P1P0C7P4 283 aa20.33■□□□□ 0.85
CDT1-202ENST00000562747 ANKRD13AQ8IZ07 590 aa20.33■□□□□ 0.85
CDT1-202ENST00000562747 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
CDT1-202ENST00000562747 TEKT1Q969V4 418 aa20.33■□□□□ 0.85
CDT1-202ENST00000562747 ELP3Q9H9T3 547 aa20.33■□□□□ 0.85
CDT1-202ENST00000562747 CENPFP49454 3210 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 TESPA1A2RU30 521 aaPredicted RBP20.32■□□□□ 0.84
CDT1-202ENST00000562747 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 CCDC158Q5M9N0 1113 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 RHPN1Q8TCX5 695 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 OPTNQ96CV9 577 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 KIF1BPQ96EK5 621 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 DBNDD2Q9BQY9 259 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 PTPN22Q9Y2R2 807 aa20.32■□□□□ 0.84
CDT1-202ENST00000562747 BRCA2P51587 3418 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
CDT1-202ENST00000562747 HHIPL2Q6UWX4 724 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.31■□□□□ 0.84
CDT1-202ENST00000562747 EAF2Q96CJ1 260 aaPredicted RBP20.31■□□□□ 0.84
CDT1-202ENST00000562747 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 MS4A4AQ96JQ5 239 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
CDT1-202ENST00000562747 MKI67P46013 3256 aaKnown RBP20.31■□□□□ 0.84
CDT1-202ENST00000562747 TCP10L2B9ZVM9 353 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 PRDX5P30044 214 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 TNFAIP1Q13829 316 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
CDT1-202ENST00000562747 HMG20BQ9P0W2 317 aa20.3■□□□□ 0.84
CDT1-202ENST00000562747 DBNLQ9UJU6 430 aaKnown RBP20.3■□□□□ 0.84
CDT1-202ENST00000562747 VGLL4Q14135 290 aa20.29■□□□□ 0.84
CDT1-202ENST00000562747 SPTY2D1Q68D10 685 aaPredicted RBP20.29■□□□□ 0.84
CDT1-202ENST00000562747 BRI3BPQ8WY22 251 aa20.29■□□□□ 0.84
CDT1-202ENST00000562747 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
CDT1-202ENST00000562747 CCDC8Q9H0W5 538 aaPredicted RBP20.29■□□□□ 0.84
CDT1-202ENST00000562747 MCAMP43121 646 aa20.28■□□□□ 0.84
CDT1-202ENST00000562747 SP3Q02447 781 aa20.28■□□□□ 0.84
CDT1-202ENST00000562747 AACSQ86V21 672 aa20.28■□□□□ 0.84
CDT1-202ENST00000562747 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
CDT1-202ENST00000562747 IL1RAPL2Q9NP60 686 aa20.28■□□□□ 0.84
CDT1-202ENST00000562747 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
CDT1-202ENST00000562747 CACNB3P54284 484 aa20.27■□□□□ 0.84
CDT1-202ENST00000562747 OTUD7BQ6GQQ9 843 aa20.27■□□□□ 0.84
CDT1-202ENST00000562747 APOBEC3HQ6NTF7 200 aaKnown RBP20.27■□□□□ 0.84
CDT1-202ENST00000562747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDT1-202ENST00000562747 ARMC5Q96C12 935 aa20.27■□□□□ 0.84
CDT1-202ENST00000562747 EFCC1Q9HA90 598 aa20.27■□□□□ 0.84
CDT1-202ENST00000562747 TLR7Q9NYK1 1049 aaKnown RBP20.27■□□□□ 0.84
CDT1-202ENST00000562747 APBB1O00213 710 aa20.26■□□□□ 0.83
CDT1-202ENST00000562747 AAMPQ13685 434 aa20.26■□□□□ 0.83
CDT1-202ENST00000562747 PI16Q6UXB8 463 aa20.26■□□□□ 0.83
CDT1-202ENST00000562747 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
CDT1-202ENST00000562747 SLF2Q8IX21 1173 aa20.26■□□□□ 0.83
CDT1-202ENST00000562747 CCL15-CCL14A0A0B4J2E2 113 aa20.25■□□□□ 0.83
CDT1-202ENST00000562747 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
CDT1-202ENST00000562747 CCL15Q16663 113 aa20.25■□□□□ 0.83
CDT1-202ENST00000562747 DZIP1Q86YF9 867 aaKnown RBP20.25■□□□□ 0.83
CDT1-202ENST00000562747 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
CDT1-202ENST00000562747 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
CDT1-202ENST00000562747 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms