RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 RFX5P48382 616 aaPredicted RBP11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TNNI2P48788 182 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 GORABQ5T7V8 394 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ITPRIPQ8IWB1 547 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MTMR14Q8NCE2 650 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TEKT1Q969V4 418 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PPP2R3BQ9Y5P8 575 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ECM29Q5VYK3 1845 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MYH13Q9UKX3 1938 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 CRKP46108 304 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 KIF23Q02241 960 aaPredicted RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MOB2Q70IA6 237 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 WDR66Q8TBY9 1149 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ARAP2Q8WZ64 1704 aa11.51□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SLC10A3P09131 477 aa11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 G3BP1Q13283 466 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TDRD3Q9H7E2 651 aaKnown RBP11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
CHRFAM7A-204ENST00000562729 FAM155AB1AL88 458 aaPredicted RBP11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MS4A1P11836 297 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 FGFR2P21802 821 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 IREB2P48200 963 aaKnown RBP11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 RASA3Q14644 834 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ZBED3Q96IU2 234 aaPredicted RBP11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 DENND2AQ9ULE3 1009 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SEMA3EO15041 775 aa11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 LDHBP07195 334 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 HDLBPQ00341 1268 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TFCP2Q12800 502 aa11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ZGPATQ8N5A5 531 aaKnown RBP11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SLC10A4Q96EP9 437 aa11.48□□□□□ -0.57
CHRFAM7A-204ENST00000562729 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TRPA1O75762 1119 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 TIMM10P62072 90 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SREBF2Q12772 1141 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 MTX1Q13505 466 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ABCF2Q9UG63 623 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ADORA1P30542 326 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PHKA1P46020 1223 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 CACNB3P54284 484 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 NBPF12Q5TAG4 269 aaPredicted RBP11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SPTY2D1Q68D10 685 aaPredicted RBP11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 SAGE1Q9NXZ1 904 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SURF6O75683 361 aaKnown RBP11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 GRIK5Q16478 980 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ANKRD13AQ8IZ07 590 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 XAGE2Q96GT9 111 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CSRNP1Q96S65 589 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CSADQ9Y600 493 aa11.45□□□□□ -0.58
CHRFAM7A-204ENST00000562729 AOX1Q06278 1338 aa11.44□□□□□ -0.58
CHRFAM7A-204ENST00000562729 PRDX5P30044 214 aa11.44□□□□□ -0.58
CHRFAM7A-204ENST00000562729 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
CHRFAM7A-204ENST00000562729 MRIQ9BWK5 157 aa11.44□□□□□ -0.58
CHRFAM7A-204ENST00000562729 UNCXA6NJT0 531 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 DIXDC1Q155Q3 683 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 LDLRAD1Q5T700 205 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
CHRFAM7A-204ENST00000562729 DCAF15Q66K64 600 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms