RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CAPN5O15484 640 aaPredicted RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 NPR1P16066 1061 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 PRELPP51888 382 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 CWF19L2Q2TBE0 894 aaKnown RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 STYK1Q6J9G0 422 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 ZNF526Q8TF50 670 aaPredicted RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 CNKSR1Q969H4 720 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 NLRP3Q96P20 1036 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
CDH13-206ENST00000562601 FER1L6Q2WGJ9 1857 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 IBTKQ9P2D0 1353 aaPredicted RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 SH3TC1Q8TE82 1336 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 IGKV5-2P06315 115 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 WDR4P57081 412 aaKnown RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 SLC10A5Q5PT55 438 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 RNF20Q5VTR2 975 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 ZNF787Q6DD87 383 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 ZNF784Q8NCA9 323 aaPredicted RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 RBM17Q96I25 401 aaKnown RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 CCDC85AQ96PX6 553 aaPredicted RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 CWC25Q9NXE8 425 aaPredicted RBP7.39□□□□□ -1.23
CDH13-206ENST00000562601 COG6Q9Y2V7 657 aa7.39□□□□□ -1.23
CDH13-206ENST00000562601 ABCC4O15439 1325 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 NFKBIEO00221 500 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 IRS4O14654 1257 aaPredicted RBP7.38□□□□□ -1.23
CDH13-206ENST00000562601 ST8SIA5O15466 376 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 NR3C2P08235 984 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 ALDH1B1P30837 517 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 SOX11P35716 441 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 TRIM28Q13263 835 aaKnown RBP7.38□□□□□ -1.23
CDH13-206ENST00000562601 CRY2Q49AN0 593 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 C7orf43Q8WVR3 580 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 DNAAF4Q8WXU2 420 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 RNF181Q9P0P0 153 aa7.38□□□□□ -1.23
CDH13-206ENST00000562601 SPEF2Q9C093 1822 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 ZIC2O95409 532 aaPredicted RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 TIMP2P16035 220 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 HOXA10P31260 410 aaPredicted RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 NEXNQ0ZGT2 675 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 IRF5Q13568 498 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 INTS6LQ5JSJ4 861 aaKnown RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 SLC4A10Q6U841 1118 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 ZBTB38Q8NAP3 1195 aaPredicted RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 CCDC191Q8NCU4 936 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 ZNF775Q96BV0 537 aaPredicted RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 COL4A1P02462 1669 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 MYH3P11055 1940 aa7.37□□□□□ -1.23
CDH13-206ENST00000562601 DICER1Q9UPY3 1922 aaKnown RBP7.37□□□□□ -1.23
CDH13-206ENST00000562601 RIC1Q4ADV7 1423 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 RNF123Q5XPI4 1314 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 ESPNB1AK53 854 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 PCCAP05165 728 aaPredicted RBP7.36□□□□□ -1.23
CDH13-206ENST00000562601 LMNB1P20700 586 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 DDX46Q7L014 1031 aaKnown RBP7.36□□□□□ -1.23
CDH13-206ENST00000562601 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 SEC31BQ9NQW1 1179 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 ZNF277Q9NRM2 450 aaPredicted RBP7.36□□□□□ -1.23
CDH13-206ENST00000562601 SMC4Q9NTJ3 1288 aa7.36□□□□□ -1.23
CDH13-206ENST00000562601 TIAM2Q8IVF5 1701 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 H7C1W4 665 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 VAC14Q08AM6 782 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 GCKRQ14397 625 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 BEND3Q5T5X7 828 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 PPP1R26Q5T8A7 1209 aaPredicted RBP7.35□□□□□ -1.23
CDH13-206ENST00000562601 CELF1Q92879 486 aaKnown RBP7.35□□□□□ -1.23
CDH13-206ENST00000562601 KLF16Q9BXK1 252 aaPredicted RBP7.35□□□□□ -1.23
CDH13-206ENST00000562601 TAOK3Q9H2K8 898 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 SENP2Q9HC62 589 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 ATP13A2Q9NQ11 1180 aa7.35□□□□□ -1.23
CDH13-206ENST00000562601 NOB1Q9ULX3 412 aaKnown RBP7.35□□□□□ -1.23
CDH13-206ENST00000562601 POTECB2RU33 542 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 PDE8AO60658 829 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 UPP2O95045 317 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 RARSP54136 660 aaKnown RBP7.34□□□□□ -1.23
CDH13-206ENST00000562601 RAB15P59190 212 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 FKBP4Q02790 459 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH13-206ENST00000562601 GRAPQ13588 217 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 SCARF1Q14162 830 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 SF3B3Q15393 1217 aaKnown RBP7.34□□□□□ -1.23
CDH13-206ENST00000562601 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 RTKN2Q8IZC4 609 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 LINS1Q8NG48 757 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 GRAPLQ8TC17 118 aaPredicted RBP7.34□□□□□ -1.23
CDH13-206ENST00000562601 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 ITPKCQ96DU7 683 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 ATP6V0A2Q9Y487 856 aa7.34□□□□□ -1.23
CDH13-206ENST00000562601 CDHR2Q9BYE9 1310 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 BCAR3O75815 825 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms