RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TMOD2Q9NZR1 351 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 PHIPQ8WWQ0 1821 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 A0A0C4DFX4 3053 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 PDHXO00330 501 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 ALDH1L1O75891 902 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 FMNL1O95466 1100 aaPredicted RBP14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 CYP2C8P10632 490 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 PSMC4P43686 418 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 NFIAQ12857 509 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 CAVIN4Q5BKX8 364 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 WDR63Q8IWG1 891 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 ZFPM1Q8IX07 1006 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 BIN2Q9UBW5 565 aaPredicted RBP14.71□□□□□ -0.05
NSMCE1-202ENST00000561960 OSBPP22059 807 aa14.7□□□□□ -0.06
NSMCE1-202ENST00000561960 PPIL2Q13356 520 aa14.7□□□□□ -0.06
NSMCE1-202ENST00000561960 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
NSMCE1-202ENST00000561960 SIL1Q9H173 461 aa14.7□□□□□ -0.06
NSMCE1-202ENST00000561960 ATAD5Q96QE3 1844 aa14.7□□□□□ -0.06
NSMCE1-202ENST00000561960 DOCK1Q14185 1865 aa14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 PDE8BO95263 885 aa14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 CCDC84Q86UT8 332 aaPredicted RBP14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 RAET1EQ8TD07 263 aa14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 ZNF341Q9BYN7 854 aa14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 RBM27Q9P2N5 1060 aaKnown RBP14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 GABRQQ9UN88 632 aa14.69□□□□□ -0.06
NSMCE1-202ENST00000561960 MYPNQ86TC9 1320 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 CCL5P13501 91 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 PRDX5P30044 214 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 PRKCZQ05513 592 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 CDC42EP5Q6NZY7 148 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 C17orf99Q6UX52 265 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 TBC1D22AQ8WUA7 517 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 DAGLAQ9Y4D2 1042 aa14.68□□□□□ -0.06
NSMCE1-202ENST00000561960 LAMA2P24043 3122 aaKnown RBP14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 ELNP15502 786 aa14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 MOGSQ13724 837 aa14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 RNF208Q9H0X6 261 aa14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 SRRDQ9UH36 339 aa14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 DNAH12Q6ZR08 3092 aa14.67□□□□□ -0.06
NSMCE1-202ENST00000561960 ADGRA2Q96PE1 1338 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 GRK4P32298 578 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 PUM3Q15397 648 aaKnown RBP14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 DCAF15Q66K64 600 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 GADL1Q6ZQY3 521 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 FAM83AQ86UY5 434 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 UNC93B1Q9H1C4 597 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 FAM198AQ9UFP1 575 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 UTYO14607 1347 aa14.66□□□□□ -0.06
NSMCE1-202ENST00000561960 IFIT1P09914 478 aaKnown RBP14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 FGFR2P21802 821 aa14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 HDLBPQ00341 1268 aaKnown RBP14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 PPATQ06203 517 aa14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 GPAT2Q6NUI2 795 aa14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
NSMCE1-202ENST00000561960 FAM196BA6NMK8 535 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 SLC5A1P13866 664 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 ADORA1P30542 326 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 ANKRD23Q86SG2 305 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 UNC80Q8N2C7 3258 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 MAST3O60307 1309 aa14.64□□□□□ -0.07
NSMCE1-202ENST00000561960 RPAP1Q9BWH6 1393 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 PHKA1P46020 1223 aa14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 RFX5P48382 616 aaPredicted RBP14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 PICALMQ13492 652 aa14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 ATG9AQ7Z3C6 839 aa14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
NSMCE1-202ENST00000561960 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 SOX1O00570 391 aaPredicted RBP14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 ANP32CO43423 234 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 RGS3P49796 1198 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 SH3BP5LQ7L8J4 393 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 ZSCAN29Q8IWY8 852 aaPredicted RBP14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 MYO5AQ9Y4I1 1855 aaKnown RBP14.62□□□□□ -0.07
NSMCE1-202ENST00000561960 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 EYA2O00167 538 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 FARP2O94887 1054 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 LDHBP07195 334 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 BCRP11274 1271 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 GJA8P48165 433 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 FCGRTP55899 365 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 ATP2B3Q16720 1220 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 WDR66Q8TBY9 1149 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 U2AF1L4Q8WU68 220 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 HOOK2Q96ED9 719 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 LRCH3Q96II8 777 aa14.61□□□□□ -0.07
NSMCE1-202ENST00000561960 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms