RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 SMC5Q8IY18 1101 aa28.48■■■□□ 2.15
SMPD3-202ENST00000561749 GBA2Q9HCG7 927 aaPredicted RBP28.48■■■□□ 2.15
SMPD3-202ENST00000561749 LDHCP07864 332 aa28.47■■■□□ 2.15
SMPD3-202ENST00000561749 FAM163AQ96GL9 167 aaPredicted RBP28.47■■■□□ 2.15
SMPD3-202ENST00000561749 GPATCH3Q96I76 525 aa28.47■■■□□ 2.15
SMPD3-202ENST00000561749 CNTNAP1P78357 1384 aa28.47■■■□□ 2.15
SMPD3-202ENST00000561749 PAPPA2Q9BXP8 1791 aa28.47■■■□□ 2.15
SMPD3-202ENST00000561749 PRKG1Q13976 671 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 CDAN1Q8IWY9 1227 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 HAUS7Q99871 368 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 TMEM39BQ9GZU3 492 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 PPP2R3BQ9Y5P8 575 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 TLL2Q9Y6L7 1015 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 CDK5RAP2Q96SN8 1893 aa28.46■■■□□ 2.15
SMPD3-202ENST00000561749 TNNI2P48788 182 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 NBPF12Q5TAG4 269 aaPredicted RBP28.45■■■□□ 2.14
SMPD3-202ENST00000561749 MOB2Q70IA6 237 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 ADGRA1Q86SQ6 560 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 C2orf69Q8N8R5 385 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 LNPKQ9C0E8 428 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 PAG1Q9NWQ8 432 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 SSC5DA1L4H1 1573 aa28.45■■■□□ 2.14
SMPD3-202ENST00000561749 GPR75-ASB3A0A0A6YYF3 556 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 NF2P35240 595 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 NFIAQ12857 509 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 TTLL12Q14166 644 aaPredicted RBP28.44■■■□□ 2.14
SMPD3-202ENST00000561749 TTF1Q15361 905 aaPredicted RBP28.44■■■□□ 2.14
SMPD3-202ENST00000561749 DNAJC5GQ8N7S2 189 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 MAGEB6Q8N7X4 407 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 FZD1Q9UP38 647 aa28.44■■■□□ 2.14
SMPD3-202ENST00000561749 CENPBP07199 599 aaPredicted RBP28.43■■■□□ 2.14
SMPD3-202ENST00000561749 CYP7A1P22680 504 aa28.43■■■□□ 2.14
SMPD3-202ENST00000561749 TCP10Q12799 353 aa28.43■■■□□ 2.14
SMPD3-202ENST00000561749 MAP3K12Q12852 859 aa28.43■■■□□ 2.14
SMPD3-202ENST00000561749 PAXIP1Q6ZW49 1069 aaPredicted RBP28.43■■■□□ 2.14
SMPD3-202ENST00000561749 SAPCD2Q86UD0 394 aa28.43■■■□□ 2.14
SMPD3-202ENST00000561749 MX1P20591 662 aa28.42■■■□□ 2.14
SMPD3-202ENST00000561749 HUNKP57058 714 aa28.42■■■□□ 2.14
SMPD3-202ENST00000561749 DEFB115Q30KQ5 88 aa28.42■■■□□ 2.14
SMPD3-202ENST00000561749 TEPSINQ96N21 525 aa28.42■■■□□ 2.14
SMPD3-202ENST00000561749 AATFQ9NY61 560 aaKnown RBP eCLIP28.42■■■□□ 2.14
SMPD3-202ENST00000561749 RHBDL3P58872 404 aa28.41■■■□□ 2.14
SMPD3-202ENST00000561749 FKBP1CQ5VVH2 108 aa28.41■■■□□ 2.14
SMPD3-202ENST00000561749 KLRG1Q96E93 195 aa28.41■■■□□ 2.14
SMPD3-202ENST00000561749 NOL10Q9BSC4 688 aaKnown RBP28.41■■■□□ 2.14
SMPD3-202ENST00000561749 FAM198AQ9UFP1 575 aa28.41■■■□□ 2.14
SMPD3-202ENST00000561749 TTC41PQ6P2S7 1318 aa28.41■■■□□ 2.14
SMPD3-202ENST00000561749 RASSF10A6NK89 507 aa28.4■■■□□ 2.14
SMPD3-202ENST00000561749 MAP4K4O95819 1239 aaPredicted RBP28.4■■■□□ 2.14
SMPD3-202ENST00000561749 GRM1Q13255 1194 aa28.4■■■□□ 2.14
SMPD3-202ENST00000561749 FAM83AQ86UY5 434 aa28.4■■■□□ 2.14
SMPD3-202ENST00000561749 SALL3Q9BXA9 1300 aa28.4■■■□□ 2.14
SMPD3-202ENST00000561749 FOCADQ5VW36 1801 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 UBE2Q2LH0YL09 131 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 RGS3P49796 1198 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 PICALMQ13492 652 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 SUPT20HL1Q3ZLR7 823 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 CHD1LQ86WJ1 897 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 MIGA1Q8NAN2 632 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 PI4K2BQ8TCG2 481 aa28.39■■■□□ 2.14
SMPD3-202ENST00000561749 SH3RF3Q8TEJ3 882 aaPredicted RBP28.39■■■□□ 2.14
SMPD3-202ENST00000561749 RFX7Q2KHR2 1363 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 WDHD1O75717 1129 aaPredicted RBP28.38■■■□□ 2.13
SMPD3-202ENST00000561749 PDE6AP16499 860 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 DYNLL1P63167 89 aaKnown RBP28.38■■■□□ 2.13
SMPD3-202ENST00000561749 NUCB1Q02818 461 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 SLC9C2Q5TAH2 1124 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 CYP4F22Q6NT55 531 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 ZFPM1Q8IX07 1006 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 FAM151AQ8WW52 585 aa28.38■■■□□ 2.13
SMPD3-202ENST00000561749 DDX4Q9NQI0 724 aaKnown RBP28.38■■■□□ 2.13
SMPD3-202ENST00000561749 ANGEL1Q9UNK9 670 aaKnown RBP28.38■■■□□ 2.13
SMPD3-202ENST00000561749 OTOFQ9HC10 1997 aa28.37■■■□□ 2.13
SMPD3-202ENST00000561749 VEGFBP49765 207 aa28.37■■■□□ 2.13
SMPD3-202ENST00000561749 SLFNL1Q499Z3 407 aa28.37■■■□□ 2.13
SMPD3-202ENST00000561749 TEX11Q8IYF3 940 aa28.37■■■□□ 2.13
SMPD3-202ENST00000561749 ERC2O15083 957 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 IGSF3O75054 1194 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 BAG3O95817 575 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 FKBP1BP68106 108 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 IDI2Q9BXS1 227 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.36■■■□□ 2.13
SMPD3-202ENST00000561749 ZNF532Q9HCE3 1301 aa28.36■■■□□ 2.13
SMPD3-202ENST00000561749 GLRX3O76003 335 aaKnown RBP28.35■■■□□ 2.13
SMPD3-202ENST00000561749 CHGBP05060 677 aa28.35■■■□□ 2.13
SMPD3-202ENST00000561749 ARMC9Q7Z3E5 817 aa28.35■■■□□ 2.13
SMPD3-202ENST00000561749 CAPNS2Q96L46 248 aa28.35■■■□□ 2.13
SMPD3-202ENST00000561749 RPAP1Q9BWH6 1393 aaPredicted RBP28.35■■■□□ 2.13
SMPD3-202ENST00000561749 PDE1AP54750 535 aa28.34■■■□□ 2.13
SMPD3-202ENST00000561749 PPP4CP60510 307 aa28.34■■■□□ 2.13
SMPD3-202ENST00000561749 PPP1R12BO60237 982 aaPredicted RBP28.33■■■□□ 2.13
SMPD3-202ENST00000561749 ENTPD3O75355 529 aa28.33■■■□□ 2.13
SMPD3-202ENST00000561749 RGMBQ6NW40 437 aa28.33■■■□□ 2.13
SMPD3-202ENST00000561749 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.33■■■□□ 2.13
SMPD3-202ENST00000561749 STAP2Q9UGK3 403 aa28.33■■■□□ 2.13
SMPD3-202ENST00000561749 MYH1P12882 1939 aa28.32■■■□□ 2.12
SMPD3-202ENST00000561749 TCRBV5S4A2TA0A5A2 114 aa28.32■■■□□ 2.12
SMPD3-202ENST00000561749 NEFLP07196 543 aa28.32■■■□□ 2.12
SMPD3-202ENST00000561749 PLCG2P16885 1265 aa28.32■■■□□ 2.12
SMPD3-202ENST00000561749 ADD2P35612 726 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms