RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TFCP2Q12800 502 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 TEKT1Q969V4 418 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 OPTNQ96CV9 577 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 MS4A4AQ96JQ5 239 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 ZBED9Q6R2W3 1325 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 GNAI2P04899 355 aa31.4■■■□□ 2.62
NME3-202ENST00000561637 TIMM10P62072 90 aa31.4■■■□□ 2.62
NME3-202ENST00000561637 APOBEC3HQ6NTF7 200 aaKnown RBP31.4■■■□□ 2.62
NME3-202ENST00000561637 CNKSR2Q8WXI2 1034 aa31.4■■■□□ 2.62
NME3-202ENST00000561637 ZNF333Q96JL9 665 aa31.4■■■□□ 2.62
NME3-202ENST00000561637 HDLBPQ00341 1268 aaKnown RBP31.39■■■□□ 2.62
NME3-202ENST00000561637 PRDX5P30044 214 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 DIXDC1Q155Q3 683 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 ZDHHC15Q96MV8 337 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 TMEM106CQ9BVX2 250 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 C1orf115Q9H7X2 142 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 PTCH2Q9Y6C5 1203 aa31.38■■■□□ 2.61
NME3-202ENST00000561637 WDR66Q8TBY9 1149 aa31.37■■■□□ 2.61
NME3-202ENST00000561637 BRI3BPQ8WY22 251 aa31.37■■■□□ 2.61
NME3-202ENST00000561637 COLQQ9Y215 455 aaPredicted RBP31.37■■■□□ 2.61
NME3-202ENST00000561637 TNFAIP1Q13829 316 aa31.36■■■□□ 2.61
NME3-202ENST00000561637 CCDC102BQ68D86 513 aa31.36■■■□□ 2.61
NME3-202ENST00000561637 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.36■■■□□ 2.61
NME3-202ENST00000561637 SUGT1Q9Y2Z0 365 aa31.35■■■□□ 2.61
NME3-202ENST00000561637 A0A1B0GUL7 405 aa31.34■■■□□ 2.61
NME3-202ENST00000561637 DAGLAQ9Y4D2 1042 aa31.34■■■□□ 2.61
NME3-202ENST00000561637 CEP290O15078 2479 aa31.33■■■□□ 2.61
NME3-202ENST00000561637 RASGRF1Q13972 1273 aa31.33■■■□□ 2.61
NME3-202ENST00000561637 TAF1CQ15572 869 aaPredicted RBP31.33■■■□□ 2.61
NME3-202ENST00000561637 SLC9C1Q4G0N8 1177 aa31.33■■■□□ 2.61
NME3-202ENST00000561637 HHIPL2Q6UWX4 724 aa31.33■■■□□ 2.61
NME3-202ENST00000561637 XAGE2Q96GT9 111 aa31.33■■■□□ 2.61
NME3-202ENST00000561637 MAST3O60307 1309 aa31.32■■■□□ 2.6
NME3-202ENST00000561637 MYCP01106 439 aaPredicted RBP31.32■■■□□ 2.6
NME3-202ENST00000561637 FAM43AQ8N2R8 423 aa31.32■■■□□ 2.6
NME3-202ENST00000561637 MRIQ9BWK5 157 aa31.32■■■□□ 2.6
NME3-202ENST00000561637 GNL3LQ9NVN8 582 aaKnown RBP31.32■■■□□ 2.6
NME3-202ENST00000561637 CCL15-CCL14A0A0B4J2E2 113 aa31.31■■■□□ 2.6
NME3-202ENST00000561637 CCL15Q16663 113 aa31.31■■■□□ 2.6
NME3-202ENST00000561637 ZFYVE28Q9HCC9 887 aa31.31■■■□□ 2.6
NME3-202ENST00000561637 VGLL4Q14135 290 aa31.3■■■□□ 2.6
NME3-202ENST00000561637 ITPRIPQ8IWB1 547 aa31.3■■■□□ 2.6
NME3-202ENST00000561637 FTSJ3Q8IY81 847 aaKnown RBP31.3■■■□□ 2.6
NME3-202ENST00000561637 DENND2AQ9ULE3 1009 aa31.3■■■□□ 2.6
NME3-202ENST00000561637 SZT2Q5T011 3432 aa31.3■■■□□ 2.6
NME3-202ENST00000561637 LDHBP07195 334 aaKnown RBP31.29■■■□□ 2.6
NME3-202ENST00000561637 TNNI2P48788 182 aa31.29■■■□□ 2.6
NME3-202ENST00000561637 SLC4A8Q2Y0W8 1093 aa31.29■■■□□ 2.6
NME3-202ENST00000561637 NBPF11Q86T75 865 aa31.29■■■□□ 2.6
NME3-202ENST00000561637 TRIOBPQ9H2D6 2365 aa31.29■■■□□ 2.6
NME3-202ENST00000561637 SALL1Q9NSC2 1324 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 GTF2A2P52657 109 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 CDC42EP5Q6NZY7 148 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 PI16Q6UXB8 463 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 PANK1Q8TE04 598 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 NEUROD6Q96NK8 337 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 ARHGAP39Q9C0H5 1083 aa31.28■■■□□ 2.6
NME3-202ENST00000561637 SEMA3EO15041 775 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 MAP3K9P80192 1104 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 NFIAQ12857 509 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 POLA2Q14181 598 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.27■■■□□ 2.62e-7■■■■□ 21.2
NME3-202ENST00000561637 OTUD5Q96G74 571 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 TMOD2Q9NZR1 351 aa31.27■■■□□ 2.6
NME3-202ENST00000561637 SH3TC2Q8TF17 1288 aa31.26■■■□□ 2.59
NME3-202ENST00000561637 AKAP2Q9Y2D5 859 aa31.26■■■□□ 2.59
NME3-202ENST00000561637 H0YGN5 161 aa31.25■■■□□ 2.59
NME3-202ENST00000561637 ZBTB7BO15156 539 aaPredicted RBP31.25■■■□□ 2.59
NME3-202ENST00000561637 G3BP1Q13283 466 aaKnown RBP eCLIP31.25■■■□□ 2.59
NME3-202ENST00000561637 ARHGEF6Q15052 776 aa31.25■■■□□ 2.59
NME3-202ENST00000561637 ATP8B2P98198 1209 aa31.24■■■□□ 2.59
NME3-202ENST00000561637 TCP10Q12799 353 aa31.24■■■□□ 2.59
NME3-202ENST00000561637 FAM83AQ86UY5 434 aa31.24■■■□□ 2.59
NME3-202ENST00000561637 MVPQ14764 893 aaKnown RBP31.23■■■□□ 2.59
NME3-202ENST00000561637 FKBP1CQ5VVH2 108 aa31.23■■■□□ 2.59
NME3-202ENST00000561637 SSH3Q8TE77 659 aa31.23■■■□□ 2.59
NME3-202ENST00000561637 ABCF2Q9UG63 623 aa31.23■■■□□ 2.59
NME3-202ENST00000561637 CSADQ9Y600 493 aa31.23■■■□□ 2.59
NME3-202ENST00000561637 MYH2Q9UKX2 1941 aa31.22■■■□□ 2.59
NME3-202ENST00000561637 ZFPM1Q8IX07 1006 aa31.22■■■□□ 2.59
NME3-202ENST00000561637 USP40Q9NVE5 1235 aa31.22■■■□□ 2.59
NME3-202ENST00000561637 HMG20BQ9P0W2 317 aa31.22■■■□□ 2.59
NME3-202ENST00000561637 FAM198AQ9UFP1 575 aa31.22■■■□□ 2.59
NME3-202ENST00000561637 ZBTB22O15209 634 aa31.21■■■□□ 2.59
NME3-202ENST00000561637 MIGA2Q7L4E1 593 aa31.21■■■□□ 2.59
NME3-202ENST00000561637 ZNF384Q8TF68 577 aa31.21■■■□□ 2.59
NME3-202ENST00000561637 SPDYE5A6NIY4 337 aa31.2■■■□□ 2.59
NME3-202ENST00000561637 TLR2O60603 784 aa31.2■■■□□ 2.59
NME3-202ENST00000561637 LACTBP83111 547 aaPredicted RBP31.2■■■□□ 2.59
NME3-202ENST00000561637 TBC1D9Q6ZT07 1266 aa31.2■■■□□ 2.59
NME3-202ENST00000561637 SNCAIPQ9Y6H5 919 aa31.2■■■□□ 2.59
NME3-202ENST00000561637 PDS5AQ29RF7 1337 aaKnown RBP31.2■■■□□ 2.58
NME3-202ENST00000561637 RPAP1Q9BWH6 1393 aaPredicted RBP31.19■■■□□ 2.58
NME3-202ENST00000561637 BTBD19C9JJ37 291 aa31.19■■■□□ 2.58
NME3-202ENST00000561637 ECM2O94769 699 aaPredicted RBP31.19■■■□□ 2.58
NME3-202ENST00000561637 ZKSCAN4Q969J2 545 aaPredicted RBP31.19■■■□□ 2.58
NME3-202ENST00000561637 GAKO14976 1311 aa31.19■■■□□ 2.58
NME3-202ENST00000561637 GORABQ5T7V8 394 aa31.18■■■□□ 2.58
NME3-202ENST00000561637 DZIP1Q86YF9 867 aaKnown RBP31.18■■■□□ 2.58
NME3-202ENST00000561637 FAM151AQ8WW52 585 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms