RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 CDC37L1Q7L3B6 337 aa11.75□□□□□ -0.53
LINC00566-201ENST00000561557 EXOC6Q8TAG9 804 aa11.75□□□□□ -0.53
LINC00566-201ENST00000561557 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
LINC00566-201ENST00000561557 ZBED3Q96IU2 234 aaPredicted RBP11.75□□□□□ -0.53
LINC00566-201ENST00000561557 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
LINC00566-201ENST00000561557 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
LINC00566-201ENST00000561557 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
LINC00566-201ENST00000561557 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
LINC00566-201ENST00000561557 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
LINC00566-201ENST00000561557 WNT10BO00744 389 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
LINC00566-201ENST00000561557 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
LINC00566-201ENST00000561557 HSPA6P17066 643 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 RASGRF1Q13972 1273 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 MAP1SQ66K74 1059 aaPredicted RBP11.74□□□□□ -0.53
LINC00566-201ENST00000561557 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 AACSQ86V21 672 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
LINC00566-201ENST00000561557 IL1RAPL2Q9NP60 686 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 DBNLQ9UJU6 430 aaKnown RBP11.74□□□□□ -0.53
LINC00566-201ENST00000561557 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
LINC00566-201ENST00000561557 F8W031 263 aaPredicted RBP11.73□□□□□ -0.53
LINC00566-201ENST00000561557 MYO1BO43795 1136 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 EGFRP00533 1210 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 LDHBP07195 334 aaKnown RBP11.73□□□□□ -0.53
LINC00566-201ENST00000561557 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00566-201ENST00000561557 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
LINC00566-201ENST00000561557 APBB1O00213 710 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
LINC00566-201ENST00000561557 MCAMP43121 646 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 CRKP46108 304 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 APLP1P51693 650 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 TMED8Q6PL24 325 aaPredicted RBP11.72□□□□□ -0.53
LINC00566-201ENST00000561557 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
LINC00566-201ENST00000561557 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
LINC00566-201ENST00000561557 COL1A1P02452 1464 aaPredicted RBP11.71□□□□□ -0.53
LINC00566-201ENST00000561557 LDHCP07864 332 aa11.71□□□□□ -0.53
LINC00566-201ENST00000561557 RBM5P52756 815 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00566-201ENST00000561557 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
LINC00566-201ENST00000561557 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.53
LINC00566-201ENST00000561557 KRT26Q7Z3Y9 468 aa11.71□□□□□ -0.53
LINC00566-201ENST00000561557 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.53
LINC00566-201ENST00000561557 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
LINC00566-201ENST00000561557 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
LINC00566-201ENST00000561557 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
LINC00566-201ENST00000561557 ATP5JP18859 108 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 PRDX5P30044 214 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 GSTO1P78417 241 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 GRIK5Q16478 980 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00566-201ENST00000561557 PRMT6Q96LA8 375 aaPredicted RBP11.7□□□□□ -0.54
LINC00566-201ENST00000561557 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
LINC00566-201ENST00000561557 ABCF2Q9UG63 623 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
LINC00566-201ENST00000561557 TMEM88BA6NKF7 163 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
LINC00566-201ENST00000561557 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 TTF1Q15361 905 aaPredicted RBP11.69□□□□□ -0.54
LINC00566-201ENST00000561557 FKBP1CQ5VVH2 108 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 DZIP1Q86YF9 867 aaKnown RBP11.69□□□□□ -0.54
LINC00566-201ENST00000561557 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 GLIS2Q9BZE0 524 aaPredicted RBP11.69□□□□□ -0.54
LINC00566-201ENST00000561557 LRP2BPQ9P2M1 347 aa11.69□□□□□ -0.54
LINC00566-201ENST00000561557 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
LINC00566-201ENST00000561557 CYP2E1P05181 493 aaPredicted RBP11.68□□□□□ -0.54
LINC00566-201ENST00000561557 PBX2P40425 430 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 ZAP70P43403 619 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 TNNI2P48788 182 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
LINC00566-201ENST00000561557 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
LINC00566-201ENST00000561557 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 ECHDC1Q9NTX5 307 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 TMOD2Q9NZR1 351 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
LINC00566-201ENST00000561557 ZNF70Q9UC06 446 aaPredicted RBP11.68□□□□□ -0.54
LINC00566-201ENST00000561557 GAKO14976 1311 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 ASTN2O75129 1339 aaPredicted RBP11.67□□□□□ -0.54
LINC00566-201ENST00000561557 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 MECOMQ03112 1051 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 ANKRD45Q5TZF3 282 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 PI16Q6UXB8 463 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 TBC1D9Q6ZT07 1266 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 NSUN4Q96CB9 384 aaKnown RBP11.67□□□□□ -0.54
LINC00566-201ENST00000561557 TDRD3Q9H7E2 651 aaKnown RBP11.67□□□□□ -0.54
LINC00566-201ENST00000561557 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 PCDHAC2Q9Y5I4 1007 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
LINC00566-201ENST00000561557 MROH7-TTC4A0A0A0MT08 1334 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms