RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431		A0A096LPE4	126 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431		A0A1W2PPZ6	126 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	PRR19	A6NJB7	356 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	DHX15	O43143	795 aa	Known RBP	6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	RECK	O95980	971 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	ZNF76	P36508	570 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	GRIK1	P39086	918 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	SPRED3	Q2MJR0	410 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	IL22RA1	Q8N6P7	574 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	BSND	Q8WZ55	320 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	TCF12	Q99081	682 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	TRIM33	Q9UPN9	1127 aa		6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	TARBP1	Q13395	1621 aa	Known RBP	6.24	□□□□□ -1.41
LRRC28-222	ENST00000561431	ABCC8	Q09428	1581 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	CDC27	P30260	824 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	GRIA4	P48058	902 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	CCDC85B	Q15834	202 aa	Predicted RBP	6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	MEI1	Q5TIA1	1274 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	C9orf131	Q5VYM1	1079 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	PRPF40B	Q6NWY9	871 aa	Known RBP	6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	FAM117B	Q6P1L5	589 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	MAP4K3	Q8IVH8	894 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	RNF34	Q969K3	372 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	ABCB6	Q9NP58	842 aa		6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	GPN3	Q9UHW5	284 aa	Predicted RBP	6.23	□□□□□ -1.41
LRRC28-222	ENST00000561431	POLA1	P09884	1462 aa	Predicted RBP	6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	IFT140	Q96RY7	1462 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	ZNF608	Q9ULD9	1512 aa	Predicted RBP	6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	NFKBIE	O00221	500 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	FBXO24	O75426	580 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	WNT11	O96014	354 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	CTSH	P09668	335 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	TPTE2	Q6XPS3	522 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	GLIS3	Q8NEA6	775 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	DCAF11	Q8TEB1	546 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	CEP44	Q9C0F1	390 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	C7orf69	Q9H7B7	122 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	SH2B1	Q9NRF2	756 aa	Predicted RBP	6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	GGT7	Q9UJ14	662 aa		6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	EIF4G3	O43432	1585 aa	Known RBP	6.22	□□□□□ -1.41
LRRC28-222	ENST00000561431	CUX1	P39880	1505 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	LMNB1	P20700	586 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	ERCC5	P28715	1186 aa	Predicted RBP	6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	ZNF157	P51786	506 aa	Predicted RBP	6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	HS2ST1	Q7LGA3	356 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	TRIM42	Q8IWZ5	723 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	CACTIN-AS1	Q8N1I8	211 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	DDX54	Q8TDD1	881 aa	Known RBP	6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	MUC3B	Q9H195	1237 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	METTL5	Q9NRN9	209 aa	Known RBP	6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	PPM1H	Q9ULR3	514 aa		6.21	□□□□□ -1.42
LRRC28-222	ENST00000561431	HMX2	A2RU54	273 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	WISP1	O95388	367 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	ARL4D	P49703	201 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	PPP2R3A	Q06190	1150 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	PCDH1	Q08174	1060 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	IKBKE	Q14164	716 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	MAP3K11	Q16584	847 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	RNF43	Q68DV7	783 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	GALNT11	Q8NCW6	608 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	SLC7A3	Q8WY07	619 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	DBNDD2	Q9BQY9	259 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	PPME1	Q9Y570	386 aa		6.2	□□□□□ -1.42
LRRC28-222	ENST00000561431	USP31	Q70CQ4	1352 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	WDR97	A6NE52	1622 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	ITPKA	P23677	461 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	ST13	P50502	369 aa	Known RBP	6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	HDLBP	Q00341	1268 aa	Known RBP	6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	PTPN12	Q05209	780 aa	Known RBP	6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	OGFOD2	Q6N063	350 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	NT5DC4	Q86YG4	428 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	RELL1	Q8IUW5	271 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	C3orf58	Q8NDZ4	430 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	FAM46A	Q96IP4	442 aa	Known RBP	6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	CEP41	Q9BYV8	373 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	ZNF576	Q9H609	170 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	SAMM50	Q9Y512	469 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	FGD5	Q6ZNL6	1462 aa		6.19	□□□□□ -1.42
LRRC28-222	ENST00000561431	RAD54L2	Q9Y4B4	1467 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	LINC01387	J3KSC0	135 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	FANCC	Q00597	558 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	UVSSA	Q2YD98	709 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	TXNDC11	Q6PKC3	985 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	UTP4	Q969X6	686 aa	Known RBP	6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	ADAM19	Q9H013	955 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	CCSER2	Q9H7U1	834 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	TMEM39A	Q9NV64	488 aa		6.18	□□□□□ -1.42
LRRC28-222	ENST00000561431	LOC105371045	A0A1W2PR82	267 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431		H3BRJ5	948 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	TM4SF5	O14894	197 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	RLBP1	P12271	317 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	EPHA1	P21709	976 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	LDLRAD1	Q5T700	205 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	LCE4A	Q5TA78	99 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	DIEXF	Q68CQ4	756 aa	Known RBP	6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	ACAD11	Q709F0	780 aa		6.17	□□□□□ -1.42
LRRC28-222	ENST00000561431	SV2B	Q7L1I2	683 aa		6.17	□□□□□ -1.42

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