RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
PSMA4-221ENST00000560842 NRSN2Q9GZP1 204 aa8.06□□□□□ -1.12
PSMA4-221ENST00000560842 ACTL7BQ9Y614 415 aa8.06□□□□□ -1.12
PSMA4-221ENST00000560842 ZBTB7CA1YPR0 619 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 PHACTR2O75167 634 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 GSTM4Q03013 218 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 ZNF792Q3KQV3 632 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 WFDC3Q8IUB2 231 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 DNAJC25Q9H1X3 360 aa8.05□□□□□ -1.12
PSMA4-221ENST00000560842 EREGO14944 169 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 FARP2O94887 1054 aaPredicted RBP8.04□□□□□ -1.12
PSMA4-221ENST00000560842 EDN3P14138 238 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 PLCL1Q15111 1095 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 DNAJC14Q6Y2X3 702 aaPredicted RBP8.04□□□□□ -1.12
PSMA4-221ENST00000560842 ZSCAN29Q8IWY8 852 aaPredicted RBP8.04□□□□□ -1.12
PSMA4-221ENST00000560842 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 ASAP3Q8TDY4 903 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 KRTAP4-11Q9BYQ6 195 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
PSMA4-221ENST00000560842 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
PSMA4-221ENST00000560842 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 ZNF574Q6ZN55 896 aaPredicted RBP8.03□□□□□ -1.12
PSMA4-221ENST00000560842 SPRED2Q7Z698 418 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 NIF3L1Q9GZT8 377 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 ACSS3Q9H6R3 686 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 AMOTL2Q9Y2J4 779 aa8.03□□□□□ -1.12
PSMA4-221ENST00000560842 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.02□□□□□ -1.13
PSMA4-221ENST00000560842 ORC1Q13415 861 aa8.02□□□□□ -1.13
PSMA4-221ENST00000560842 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
PSMA4-221ENST00000560842 TMC1Q8TDI8 760 aa8.02□□□□□ -1.13
PSMA4-221ENST00000560842 CPNE3O75131 537 aaKnown RBP8.01□□□□□ -1.13
PSMA4-221ENST00000560842 RAB6AP20340 208 aa8.01□□□□□ -1.13
PSMA4-221ENST00000560842 PLCB3Q01970 1234 aa8.01□□□□□ -1.13
PSMA4-221ENST00000560842 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
PSMA4-221ENST00000560842 PEAR1Q5VY43 1037 aaPredicted RBP8.01□□□□□ -1.13
PSMA4-221ENST00000560842 OGFOD3Q6PK18 319 aa8.01□□□□□ -1.13
PSMA4-221ENST00000560842 CSRNP1Q96S65 589 aa8.01□□□□□ -1.13
PSMA4-221ENST00000560842 C1GALT1Q9NS00 363 aa8.01□□□□□ -1.13
PSMA4-221ENST00000560842 EIF1AYO14602 144 aaKnown RBP8□□□□□ -1.13
PSMA4-221ENST00000560842 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
PSMA4-221ENST00000560842 PKN1Q16512 942 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 CCDC27Q2M243 656 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 DYMQ7RTS9 669 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 GLIS3Q8NEA6 775 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 MISP3Q96FF7 219 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 GSX1Q9H4S2 264 aaPredicted RBP8□□□□□ -1.13
PSMA4-221ENST00000560842 FAM105AQ9NUU6 356 aa8□□□□□ -1.13
PSMA4-221ENST00000560842 MAOBP27338 520 aa7.99□□□□□ -1.13
PSMA4-221ENST00000560842 HP1BP3Q5SSJ5 553 aaPredicted RBP7.99□□□□□ -1.13
PSMA4-221ENST00000560842 USPL1Q5W0Q7 1092 aa7.99□□□□□ -1.13
PSMA4-221ENST00000560842 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
PSMA4-221ENST00000560842 CYP11A1P05108 521 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 CTSBP07858 339 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 ERCC3P19447 782 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 BNIP3Q12983 259 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 KIAA0319Q5VV43 1072 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 FAM168AQ92567 244 aa7.98□□□□□ -1.13
PSMA4-221ENST00000560842 ANKRD33BA6NCL7 494 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 DYNC1LI2O43237 492 aaPredicted RBP7.97□□□□□ -1.13
PSMA4-221ENST00000560842 FUT4P22083 530 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 ASPAP45381 313 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 POU4F3Q15319 338 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 KRTAP19-4Q3LI73 84 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 AKAP4Q5JQC9 854 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 CCDC74AQ96AQ1 378 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
PSMA4-221ENST00000560842 A0A1W2PP55 124 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 KRTAP9-7A8MTY7 169 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 ZNF423Q2M1K9 1284 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 RC3H2Q9HBD1 1191 aaKnown RBP7.96□□□□□ -1.14
PSMA4-221ENST00000560842 LATS2Q9NRM7 1088 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 RAD18Q9NS91 495 aa7.96□□□□□ -1.14
PSMA4-221ENST00000560842 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
PSMA4-221ENST00000560842 P4HBP07237 508 aaKnown RBP7.95□□□□□ -1.14
PSMA4-221ENST00000560842 RNASE1P07998 156 aaKnown RBP7.95□□□□□ -1.14
PSMA4-221ENST00000560842 CD8BP10966 210 aa7.95□□□□□ -1.14
PSMA4-221ENST00000560842 PCDH1Q08174 1060 aa7.95□□□□□ -1.14
PSMA4-221ENST00000560842 FBF1Q8TES7 1133 aa7.95□□□□□ -1.14
PSMA4-221ENST00000560842 SLC38A3Q99624 504 aa7.95□□□□□ -1.14
PSMA4-221ENST00000560842 CLEC4MQ9H2X3 399 aaPredicted RBP7.95□□□□□ -1.14
PSMA4-221ENST00000560842 MBNL3Q9NUK0 354 aaKnown RBP7.95□□□□□ -1.14
PSMA4-221ENST00000560842 A0A096LPE4 126 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 PNMA6FA0A0J9YX94 578 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 TMCO4Q5TGY1 634 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 CCNJLQ8IV13 435 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 TCF12Q99081 682 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 AP4E1Q9UPM8 1137 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
PSMA4-221ENST00000560842 ADAMTS6Q9UKP5 1117 aa7.93□□□□□ -1.14
PSMA4-221ENST00000560842 VAV3Q9UKW4 847 aa7.93□□□□□ -1.14
PSMA4-221ENST00000560842 MESP2Q0VG99 397 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms