RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
TRPM1-212ENST00000560801 APPBP2Q92624 585 aa11.23□□□□□ -0.61
TRPM1-212ENST00000560801 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
TRPM1-212ENST00000560801 PI4KBQ9UBF8 816 aa11.23□□□□□ -0.61
TRPM1-212ENST00000560801 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
TRPM1-212ENST00000560801 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
TRPM1-212ENST00000560801 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
TRPM1-212ENST00000560801 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
TRPM1-212ENST00000560801 BACH1O14867 736 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 CDHR2Q9BYE9 1310 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
TRPM1-212ENST00000560801 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
TRPM1-212ENST00000560801 ASNSP08243 561 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
TRPM1-212ENST00000560801 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
TRPM1-212ENST00000560801 RAB34Q9BZG1 259 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 CIAO1O76071 339 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 UBXN2AP68543 259 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 NBPF11Q86T75 865 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 DHX37Q8IY37 1157 aaKnown RBP11.22□□□□□ -0.61
TRPM1-212ENST00000560801 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
TRPM1-212ENST00000560801 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 USP17L21D6R901 530 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 LIG1P18858 919 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 RASA3Q14644 834 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 GPC2Q8N158 579 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 PAF1Q8N7H5 531 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 AGBL3Q8NEM8 1001 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 BCL9O00512 1426 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 ADCY9O60503 1353 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-212ENST00000560801 RFX1P22670 979 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.61
TRPM1-212ENST00000560801 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-212ENST00000560801 RGS12O14924 1447 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 SSRP1Q08945 709 aaKnown RBP11.21□□□□□ -0.62
TRPM1-212ENST00000560801 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.62
TRPM1-212ENST00000560801 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.62
TRPM1-212ENST00000560801 COPRSQ9NQ92 184 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 DDR1Q08345 913 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 CCDC174Q6PII3 467 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 FCHSD1Q86WN1 690 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.62
TRPM1-212ENST00000560801 MYOZ2Q9NPC6 264 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 SERPINB13Q9UIV8 391 aa11.21□□□□□ -0.62
TRPM1-212ENST00000560801 GPAA1O43292 621 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 ALAS1P13196 640 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 NAPAP54920 295 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 TMEM266Q2M3C6 531 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 GDF11O95390 407 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 NTSR2O95665 410 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
TRPM1-212ENST00000560801 CXCL9Q07325 125 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 PRM3Q9NNZ6 103 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 PNMA2Q9UL42 364 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 UBE2Q2LH0YL09 131 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 PDE1AP54750 535 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 SYAP1Q96A49 352 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-212ENST00000560801 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
TRPM1-212ENST00000560801 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-212ENST00000560801 MYCLP12524 364 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-212ENST00000560801 MCM2P49736 904 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CALM1P0DP23 149 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CALM2P0DP24 149 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CALM3P0DP25 149 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 TFAP4Q01664 338 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 STK38Q15208 465 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 PXDNQ92626 1479 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CAMTA1Q9Y6Y1 1673 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRPM1-212ENST00000560801 SNAPC2Q13487 334 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 LDHDQ86WU2 507 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 BCL9LQ86UU0 1499 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 CCDC85CA6NKD9 419 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 SNAP23O00161 211 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 ZBTB43O43298 467 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 ADORA1P30542 326 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
TRPM1-212ENST00000560801 LPXNO60711 386 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 CCDC73Q6ZRK6 1079 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 ZHX1Q9UKY1 873 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-212ENST00000560801 GINS2Q9Y248 185 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 CCL15-CCL14A0A0B4J2E2 113 aa11.18□□□□□ -0.62
TRPM1-212ENST00000560801 PDE6AP16499 860 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms