RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SYNE4Q8N205 404 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
CCDC33-209ENST00000560565 TIGD1Q96MW7 591 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 CRAMP1Q96RY5 1269 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 LLPHQ9BRT6 129 aaKnown RBP9.96□□□□□ -0.82
CCDC33-209ENST00000560565 TAOK3Q9H2K8 898 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 ECHDC1Q9NTX5 307 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 ANO10Q9NW15 660 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 CTNNA3Q9UI47 895 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.82
CCDC33-209ENST00000560565 PDE8AO60658 829 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 CIAO1O76071 339 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 SLU7O95391 586 aaKnown RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 ZNF165P49910 485 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 NCBP1Q09161 790 aaKnown RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 OS9Q13438 667 aaPredicted RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 LMBR1LQ6UX01 489 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 FILIP1Q7Z7B0 1213 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 FAM89AQ96GI7 184 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 ZNF396Q96N95 335 aaPredicted RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 DNAJC2Q99543 621 aaKnown RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 TMX4Q9H1E5 349 aaPredicted RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 RTL9Q8NET4 1388 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 MYH13Q9UKX3 1938 aa9.95□□□□□ -0.82
CCDC33-209ENST00000560565 DICER1Q9UPY3 1922 aaKnown RBP9.95□□□□□ -0.82
CCDC33-209ENST00000560565 LTBP3Q9NS15 1303 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 GOLGA6L9A6NEM1 432 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 DNM1Q05193 864 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 PTPN12Q05209 780 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 TSGA10IPQ3SY00 556 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 CC2D2BQ6DHV5 1058 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 BLOC1S2Q6QNY1 142 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC186Q7Z3E2 898 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 JAKMIP1Q96N16 626 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 CWC15Q9P013 229 aaKnown RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 ZHX1Q9UKY1 873 aaPredicted RBP9.94□□□□□ -0.82
CCDC33-209ENST00000560565 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
CCDC33-209ENST00000560565 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 BBOX1O75936 387 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 PTGS1P23219 599 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 IL15P40933 162 aaPredicted RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 NOL8Q76FK4 1167 aaKnown RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC83Q8IWF9 413 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 PI4K2BQ8TCG2 481 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 ZNF830Q96NB3 372 aaPredicted RBP9.93□□□□□ -0.82
CCDC33-209ENST00000560565 BPIFA3Q9BQP9 254 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 KCNF1Q9H3M0 494 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 CBX8Q9HC52 389 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 TAF1P21675 1872 aa9.93□□□□□ -0.82
CCDC33-209ENST00000560565 AKAP11Q9UKA4 1901 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 H3BQV1 296 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 CBFA2T2O43439 604 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 U2AF2P26368 475 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 CTSWP56202 376 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 FSTL1Q12841 308 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 IFIT5Q13325 482 aaKnown RBP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 TERF2Q15554 542 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 ANO6Q4KMQ2 910 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 PIAS4Q8N2W9 510 aaPredicted RBP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 TXLNBQ8N3L3 684 aa9.92□□□□□ -0.82
CCDC33-209ENST00000560565 ZNF277Q9NRM2 450 aaPredicted RBP9.92□□□□□ -0.82
CCDC33-209ENST00000560565 ANKRD18BA2A2Z9 1011 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 GLTPD2A6NH11 291 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 EYA2O00167 538 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 SASH1O94885 1247 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 SF3B3Q15393 1217 aaKnown RBP9.91□□□□□ -0.82
CCDC33-209ENST00000560565 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 LRRC8AQ8IWT6 810 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 TTLL11Q8NHH1 800 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 MAP4K1Q92918 833 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 C16orf45Q96MC5 204 aaPredicted RBP9.91□□□□□ -0.82
CCDC33-209ENST00000560565 PSMD1Q99460 953 aa9.91□□□□□ -0.82
CCDC33-209ENST00000560565 NOL10Q9BSC4 688 aaKnown RBP9.91□□□□□ -0.82
CCDC33-209ENST00000560565 RRAGCQ9HB90 399 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms