RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF341Q9BYN7 854 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 DAGLAQ9Y4D2 1042 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 IGSF3O75054 1194 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 MAP4K4O95819 1239 aaPredicted RBP17.36■□□□□ 0.37
TPM1-223ENST00000560445 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 PRDX5P30044 214 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 GSTO1P78417 241 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 TFCP2Q12800 502 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
TPM1-223ENST00000560445 VGLL4Q14135 290 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 XAGE2Q96GT9 111 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 ELP3Q9H9T3 547 aa17.36■□□□□ 0.37
TPM1-223ENST00000560445 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
TPM1-223ENST00000560445 TESPA1A2RU30 521 aaPredicted RBP17.35■□□□□ 0.37
TPM1-223ENST00000560445 LDHCP07864 332 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 ERO1BQ86YB8 467 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 ITPRIPQ8IWB1 547 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 ERO1AQ96HE7 468 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 WRNIP1Q96S55 665 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 ZCCHC17Q9NP64 241 aaKnown RBP17.35■□□□□ 0.37
TPM1-223ENST00000560445 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 FZD1Q9UP38 647 aa17.35■□□□□ 0.37
TPM1-223ENST00000560445 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 CETPP11597 493 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 CACNB3P54284 484 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
TPM1-223ENST00000560445 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.34■□□□□ 0.37
TPM1-223ENST00000560445 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
TPM1-223ENST00000560445 GPR108Q9NPR9 543 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 USP40Q9NVE5 1235 aa17.34■□□□□ 0.37
TPM1-223ENST00000560445 AK9Q5TCS8 1911 aa17.33■□□□□ 0.37
TPM1-223ENST00000560445 GAKO14976 1311 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 ENTPD3O75355 529 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 ADORA1P30542 326 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 TIMM10P62072 90 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 SNAPC2Q13487 334 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 DIXDC1Q155Q3 683 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 FBXO46Q6PJ61 603 aaPredicted RBP17.33■□□□□ 0.36
TPM1-223ENST00000560445 OTUD5Q96G74 571 aa17.33■□□□□ 0.36
TPM1-223ENST00000560445 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
TPM1-223ENST00000560445 MYH2Q9UKX2 1941 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 CCL15-CCL14A0A0B4J2E2 113 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 RGS19P49795 217 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 PPIL2Q13356 520 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 CCL15Q16663 113 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 NOL10Q9BSC4 688 aaKnown RBP17.32■□□□□ 0.36
TPM1-223ENST00000560445 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 ZFYVE28Q9HCC9 887 aa17.32■□□□□ 0.36
TPM1-223ENST00000560445 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
TPM1-223ENST00000560445 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
TPM1-223ENST00000560445 PPATQ06203 517 aa17.31■□□□□ 0.36
TPM1-223ENST00000560445 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
TPM1-223ENST00000560445 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 PNMA6EA0A0J9YXQ4 647 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 TCP10Q12799 353 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 POLA2Q14181 598 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
TPM1-223ENST00000560445 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
TPM1-223ENST00000560445 SNCAIPQ9Y6H5 919 aa17.3■□□□□ 0.36
TPM1-223ENST00000560445 DOCK2Q92608 1830 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
TPM1-223ENST00000560445 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
TPM1-223ENST00000560445 GJA5P36382 358 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 CRHR2Q13324 411 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 MS4A4AQ96JQ5 239 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
TPM1-223ENST00000560445 PLCG2P16885 1265 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 BTDP43251 543 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 RGS3P49796 1198 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 SP3Q02447 781 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 NOL9Q5SY16 702 aaKnown RBP17.28■□□□□ 0.36
TPM1-223ENST00000560445 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
TPM1-223ENST00000560445 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 RAI14Q9P0K7 980 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 HMG20BQ9P0W2 317 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 LRP2BPQ9P2M1 347 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 ZNF112Q9UJU3 913 aa17.28■□□□□ 0.36
TPM1-223ENST00000560445 BAG3O95817 575 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 MECOMQ03112 1051 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 NFIAQ12857 509 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 KIF22Q14807 665 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 TNNI3KQ59H18 835 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 CERS3Q8IU89 383 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.36
TPM1-223ENST00000560445 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
TPM1-223ENST00000560445 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
TPM1-223ENST00000560445 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms