RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 RASAL3Q86YV0 1011 aa18.23■□□□□ 0.51
IDH3A-219ENST00000560414 COL1A1P02452 1464 aaPredicted RBP18.22■□□□□ 0.51
IDH3A-219ENST00000560414 RASA3Q14644 834 aa18.22■□□□□ 0.51
IDH3A-219ENST00000560414 FBXO22Q8NEZ5 403 aa18.22■□□□□ 0.51
IDH3A-219ENST00000560414 ARAP2Q8WZ64 1704 aa18.21■□□□□ 0.51
IDH3A-219ENST00000560414 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
IDH3A-219ENST00000560414 NBPF12Q5TAG4 269 aaPredicted RBP18.21■□□□□ 0.51
IDH3A-219ENST00000560414 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
IDH3A-219ENST00000560414 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
IDH3A-219ENST00000560414 TEKT1Q969V4 418 aa18.21■□□□□ 0.51
IDH3A-219ENST00000560414 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
IDH3A-219ENST00000560414 ANGEL1Q9UNK9 670 aaKnown RBP18.21■□□□□ 0.51
IDH3A-219ENST00000560414 A0A1B0GUL7 405 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 ATMINO43313 823 aaPredicted RBP18.2■□□□□ 0.5
IDH3A-219ENST00000560414 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
IDH3A-219ENST00000560414 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
IDH3A-219ENST00000560414 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 ASTLQ6HA08 431 aaPredicted RBP18.2■□□□□ 0.5
IDH3A-219ENST00000560414 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 PPP2R3BQ9Y5P8 575 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 ECM29Q5VYK3 1845 aa18.2■□□□□ 0.5
IDH3A-219ENST00000560414 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 CACNB3P54284 484 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.5
IDH3A-219ENST00000560414 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 XAGE2Q96GT9 111 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 NEUROD6Q96NK8 337 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 CSRNP1Q96S65 589 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 SUGT1Q9Y2Z0 365 aa18.19■□□□□ 0.5
IDH3A-219ENST00000560414 PRDX5P30044 214 aa18.18■□□□□ 0.5
IDH3A-219ENST00000560414 APOBEC3HQ6NTF7 200 aaKnown RBP18.18■□□□□ 0.5
IDH3A-219ENST00000560414 ZDHHC15Q96MV8 337 aa18.18■□□□□ 0.5
IDH3A-219ENST00000560414 MRIQ9BWK5 157 aa18.18■□□□□ 0.5
IDH3A-219ENST00000560414 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
IDH3A-219ENST00000560414 CA12O43570 354 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 PPP1R12BO60237 982 aaPredicted RBP18.17■□□□□ 0.5
IDH3A-219ENST00000560414 TNFAIP1Q13829 316 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 DIXDC1Q155Q3 683 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 SUPT20HL1Q3ZLR7 823 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 LDLRAD1Q5T700 205 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 SP7Q8TDD2 431 aaPredicted RBP18.17■□□□□ 0.5
IDH3A-219ENST00000560414 SSH3Q8TE77 659 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 DCBLD2Q96PD2 775 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 TMEM39BQ9GZU3 492 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 MAST3O60307 1309 aa18.17■□□□□ 0.5
IDH3A-219ENST00000560414 MYH13Q9UKX3 1938 aa18.16■□□□□ 0.5
IDH3A-219ENST00000560414 SEMA3EO15041 775 aa18.16■□□□□ 0.5
IDH3A-219ENST00000560414 RASGRF1Q13972 1273 aa18.16■□□□□ 0.5
IDH3A-219ENST00000560414 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
IDH3A-219ENST00000560414 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
IDH3A-219ENST00000560414 USP2O75604 605 aaPredicted RBP18.15■□□□□ 0.5
IDH3A-219ENST00000560414 TRPA1O75762 1119 aa18.15■□□□□ 0.5
IDH3A-219ENST00000560414 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
IDH3A-219ENST00000560414 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
IDH3A-219ENST00000560414 MAP3K11Q16584 847 aa18.15■□□□□ 0.5
IDH3A-219ENST00000560414 CLMNQ96JQ2 1002 aa18.15■□□□□ 0.5
IDH3A-219ENST00000560414 RNF186Q9NXI6 227 aa18.15■□□□□ 0.5
IDH3A-219ENST00000560414 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
IDH3A-219ENST00000560414 SURF6O75683 361 aaKnown RBP18.14■□□□□ 0.49
IDH3A-219ENST00000560414 TNNI2P48788 182 aa18.14■□□□□ 0.49
IDH3A-219ENST00000560414 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
IDH3A-219ENST00000560414 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
IDH3A-219ENST00000560414 SALL1Q9NSC2 1324 aa18.14■□□□□ 0.49
IDH3A-219ENST00000560414 GORABQ5T7V8 394 aa18.13■□□□□ 0.49
IDH3A-219ENST00000560414 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
IDH3A-219ENST00000560414 SLC10A4Q96EP9 437 aa18.13■□□□□ 0.49
IDH3A-219ENST00000560414 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
IDH3A-219ENST00000560414 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
IDH3A-219ENST00000560414 IREB2P48200 963 aaKnown RBP18.12■□□□□ 0.49
IDH3A-219ENST00000560414 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
IDH3A-219ENST00000560414 CDC42EP5Q6NZY7 148 aa18.12■□□□□ 0.49
IDH3A-219ENST00000560414 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
IDH3A-219ENST00000560414 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
IDH3A-219ENST00000560414 PPP1R37O75864 691 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 MS4A1P11836 297 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
IDH3A-219ENST00000560414 MS4A4AQ96JQ5 239 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 HMG20BQ9P0W2 317 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 NOP58Q9Y2X3 529 aaKnown RBP18.11■□□□□ 0.49
IDH3A-219ENST00000560414 CASP8AP2Q9UKL3 1982 aa18.11■□□□□ 0.49
IDH3A-219ENST00000560414 PDS5AQ29RF7 1337 aaKnown RBP18.1■□□□□ 0.49
IDH3A-219ENST00000560414 TNNI3KQ59H18 835 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 FAM83AQ86UY5 434 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 WNK4Q96J92 1243 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 DBNDD2Q9BQY9 259 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 USP40Q9NVE5 1235 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 FPGT-TNNI3KV9GXZ4 949 aa18.1■□□□□ 0.49
IDH3A-219ENST00000560414 ARID4AP29374 1257 aaPredicted RBP18.09■□□□□ 0.49
IDH3A-219ENST00000560414 TM4SF4P48230 202 aa18.09■□□□□ 0.49
IDH3A-219ENST00000560414 TCP10Q12799 353 aa18.09■□□□□ 0.49
IDH3A-219ENST00000560414 NFIAQ12857 509 aa18.09■□□□□ 0.49
IDH3A-219ENST00000560414 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
IDH3A-219ENST00000560414 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
IDH3A-219ENST00000560414 ANKRD13AQ8IZ07 590 aa18.09■□□□□ 0.49
IDH3A-219ENST00000560414 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms