RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 GPR108Q9NPR9 543 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 GPR25O00155 361 aa18.73■□□□□ 0.59
SNRPA1-210ENST00000560383 SURF6O75683 361 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-210ENST00000560383 HHIPL2Q6UWX4 724 aa18.73■□□□□ 0.59
SNRPA1-210ENST00000560383 MLLT1Q03111 559 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-210ENST00000560383 RASGRF1Q13972 1273 aa18.72■□□□□ 0.59
SNRPA1-210ENST00000560383 FKBP1CQ5VVH2 108 aa18.72■□□□□ 0.59
SNRPA1-210ENST00000560383 IFNL1Q8IU54 200 aa18.72■□□□□ 0.59
SNRPA1-210ENST00000560383 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-210ENST00000560383 RPAP1Q9BWH6 1393 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-210ENST00000560383 FAM83AQ86UY5 434 aa18.71■□□□□ 0.59
SNRPA1-210ENST00000560383 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-210ENST00000560383 TCP10L2B9ZVM9 353 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 APOBEC3HQ6NTF7 200 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 TMEM39BQ9GZU3 492 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
SNRPA1-210ENST00000560383 TESPA1A2RU30 521 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 FKTNO75072 461 aa18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 ARID4AP29374 1257 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 PRDX5P30044 214 aa18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 GJA5P36382 358 aa18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
SNRPA1-210ENST00000560383 IGF2BP3O00425 579 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 CDAN1Q8IWY9 1227 aa18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
SNRPA1-210ENST00000560383 CENPFP49454 3210 aa18.67■□□□□ 0.58
SNRPA1-210ENST00000560383 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-210ENST00000560383 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
SNRPA1-210ENST00000560383 HMG20BQ9P0W2 317 aa18.67■□□□□ 0.58
SNRPA1-210ENST00000560383 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
SNRPA1-210ENST00000560383 MAP3K9P80192 1104 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 VGLL4Q14135 290 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 GORABQ5T7V8 394 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 FBXO46Q6PJ61 603 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 ZNF512BQ96KM6 892 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 R3HDMLQ9H3Y0 253 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 ELP3Q9H9T3 547 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 DAGLAQ9Y4D2 1042 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 CSADQ9Y600 493 aa18.66■□□□□ 0.58
SNRPA1-210ENST00000560383 HMMRO75330 724 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 UQCRFS1P1P0C7P4 283 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 CACNB3P54284 484 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 HSP90AB4PQ58FF6 505 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 SPTY2D1Q68D10 685 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 DBNDD2Q9BQY9 259 aa18.65■□□□□ 0.58
SNRPA1-210ENST00000560383 MCAMP43121 646 aa18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 DCAF15Q66K64 600 aa18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 FAM163AQ96GL9 167 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 MS4A4AQ96JQ5 239 aa18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 GAKO14976 1311 aa18.64■□□□□ 0.57
SNRPA1-210ENST00000560383 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 SPDYE5A6NIY4 337 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 GTF2A2P52657 109 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 PTPN18Q99952 460 aa18.63■□□□□ 0.57
SNRPA1-210ENST00000560383 KCNA4P22459 653 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 SOX10P56693 466 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 CRHR2Q13324 411 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 CDC42EP5Q6NZY7 148 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 YTHDC1Q96MU7 727 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 WRNIP1Q96S55 665 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 ABCF2Q9UG63 623 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 DOCK2Q92608 1830 aa18.62■□□□□ 0.57
SNRPA1-210ENST00000560383 IGSF3O75054 1194 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 TTC39AQ5SRH9 613 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 DZIP1Q86YF9 867 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 RHPN1Q8TCX5 695 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 ZNF384Q8TF68 577 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 ZCCHC17Q9NP64 241 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
SNRPA1-210ENST00000560383 MECOMQ03112 1051 aa18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 ERO1BQ86YB8 467 aa18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 BRI3BPQ8WY22 251 aa18.6■□□□□ 0.57
SNRPA1-210ENST00000560383 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms