RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
CARMIL3-203ENST00000560349 PROM2Q8N271 834 aa16.55■□□□□ 0.24
CARMIL3-203ENST00000560349 PPP1R9BQ96SB3 815 aa16.55■□□□□ 0.24
CARMIL3-203ENST00000560349 KRT85P78386 507 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 TMEM87AQ8NBN3 555 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 UBE2Q2LH0YL09 131 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 ADD1P35611 737 aaKnown RBP16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 UBE2HP62256 183 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 CCDC173Q0VFZ6 552 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 COL24A1Q17RW2 1714 aa16.54■□□□□ 0.24
CARMIL3-203ENST00000560349 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 HIBADHP31937 336 aaKnown RBP16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 RESTQ13127 1097 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 BRWD3Q6RI45 1802 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 NFXL1Q6ZNB6 911 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 CPLX1O14810 134 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 PRDM1O75626 825 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 LRSAM1Q6UWE0 723 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 FBXO33Q7Z6M2 555 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 PHKBQ93100 1093 aa16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
CARMIL3-203ENST00000560349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 SERPINB2P05120 415 aa16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 MECOMQ03112 1051 aa16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 DDR1Q08345 913 aa16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 TXNRD1Q16881 649 aa16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
CARMIL3-203ENST00000560349 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.23
CARMIL3-203ENST00000560349 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.23
CARMIL3-203ENST00000560349 LLPHQ9BRT6 129 aaKnown RBP16.52■□□□□ 0.23
CARMIL3-203ENST00000560349 LIG1P18858 919 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 CDC27P30260 824 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 GRAPQ13588 217 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 GRIK5Q16478 980 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 CAMK4Q16566 473 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 LEO1Q8WVC0 666 aaPredicted RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
CARMIL3-203ENST00000560349 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 HMGN5P82970 282 aaKnown RBP16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 NSUN4Q96CB9 384 aaKnown RBP16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 ANKRD2Q9GZV1 360 aa16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
CARMIL3-203ENST00000560349 POLR3DP05423 398 aaPredicted RBP16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 EVCP57679 992 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 PPARAQ07869 468 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 ALX1Q15699 326 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
CARMIL3-203ENST00000560349 BAZ2AQ9UIF9 1905 aaKnown RBP16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 RGL2O15211 777 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 GPSM2P81274 684 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 CCDC183Q5T5S1 534 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
CARMIL3-203ENST00000560349 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 APBA3O96018 575 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 CYP2D6P10635 497 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 ZBTB43O43298 467 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 UFL1O94874 794 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 ADRA2BP18089 450 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 GNAT2P19087 354 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 ST5P78524 1137 aa16.47■□□□□ 0.23
CARMIL3-203ENST00000560349 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 TSPY26PQ9H489 355 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms