RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 MMP14P50281 582 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 IRF5Q13568 498 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 MXD3Q9BW11 206 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
KNSTRN-209ENST00000560220 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 UFL1O94874 794 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 TFF2Q03403 129 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 MGAMO43451 1857 aa13.06□□□□□ -0.32
KNSTRN-209ENST00000560220 OTOFQ9HC10 1997 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 IGFBP4P22692 258 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 DNAJB2P25686 324 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
KNSTRN-209ENST00000560220 COL6A1P12109 1028 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 SNAPC2Q13487 334 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 VGLL4Q14135 290 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 KCTD2Q14681 263 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 CSADQ9Y600 493 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 USP34Q70CQ2 3546 aa13.04□□□□□ -0.32
KNSTRN-209ENST00000560220 RGS3P49796 1198 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 CACNA1BQ00975 2339 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
KNSTRN-209ENST00000560220 ZDBF2Q9HCK1 2354 aa13.02□□□□□ -0.32
KNSTRN-209ENST00000560220 PDHXO00330 501 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 RLBP1P12271 317 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 TIFAQ96CG3 184 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 XIRP2A4UGR9 3374 aa13.02□□□□□ -0.33
KNSTRN-209ENST00000560220 SPDYE5A6NIY4 337 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 CHL1O00533 1208 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 DLGAP5Q15398 846 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
KNSTRN-209ENST00000560220 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 LTBP2Q14767 1821 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 HSFX4A0A1B0GTS1 333 aaPredicted RBP13□□□□□ -0.33
KNSTRN-209ENST00000560220 HSFX3A0A1B0GWH4 333 aaPredicted RBP13□□□□□ -0.33
KNSTRN-209ENST00000560220 BCRP11274 1271 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 ADGRE1Q14246 886 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 ANKRD23Q86SG2 305 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 VEZTQ9HBM0 779 aa13□□□□□ -0.33
KNSTRN-209ENST00000560220 IRF6O14896 467 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 MYO1BO43795 1136 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 GFRA3O60609 400 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 VAMP4O75379 141 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 HMGCRP04035 888 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 COL9A2Q14055 689 aaPredicted RBP12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 MCM10Q7L590 875 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 BADQ92934 168 aa12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
KNSTRN-209ENST00000560220 CLRN2A0PK11 232 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 MYL6BP14649 208 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 RASA3Q14644 834 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 ERO1BQ86YB8 467 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
KNSTRN-209ENST00000560220 KCNH4Q9UQ05 1017 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms