RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 BTDP43251 543 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 VEGFBP49765 207 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 GSTO1P78417 241 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 PICALMQ13492 652 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 NAA16Q6N069 864 aaPredicted RBP10.43□□□□□ -0.74
USP3-217ENST00000560070 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 ZFPM1Q8IX07 1006 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 SLF2Q8IX21 1173 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 OTUD7AQ8TE49 926 aaPredicted RBP10.43□□□□□ -0.74
USP3-217ENST00000560070 NSUN4Q96CB9 384 aaKnown RBP10.43□□□□□ -0.74
USP3-217ENST00000560070 ZNF512BQ96KM6 892 aaPredicted RBP10.43□□□□□ -0.74
USP3-217ENST00000560070 TMOD2Q9NZR1 351 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 TLL2Q9Y6L7 1015 aa10.43□□□□□ -0.74
USP3-217ENST00000560070 ATP5JP18859 108 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 TNNI2P48788 182 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 DYNLL1P63167 89 aaKnown RBP10.42□□□□□ -0.74
USP3-217ENST00000560070 NFIAQ12857 509 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 HDAC1Q13547 482 aaPredicted RBP10.42□□□□□ -0.74
USP3-217ENST00000560070 SAPCD2Q86UD0 394 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 KLRG1Q96E93 195 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 MYH3P11055 1940 aa10.42□□□□□ -0.74
USP3-217ENST00000560070 MROH7-TTC4A0A0A0MT08 1334 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 PDS5AQ29RF7 1337 aaKnown RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 AOC2O75106 756 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 ZNF157P51786 506 aaPredicted RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 AAMPQ13685 434 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 SUPT20HL1Q3ZLR7 823 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 ZSCAN29Q8IWY8 852 aaPredicted RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 MAGEB6Q8N7X4 407 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 MIGA1Q8NAN2 632 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 SH3RF3Q8TEJ3 882 aaPredicted RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 FAM163AQ96GL9 167 aaPredicted RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 NOL10Q9BSC4 688 aaKnown RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 LNPKQ9C0E8 428 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 ECHDC1Q9NTX5 307 aa10.41□□□□□ -0.74
USP3-217ENST00000560070 AATFQ9NY61 560 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP3-217ENST00000560070 ANGEL1Q9UNK9 670 aaKnown RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
USP3-217ENST00000560070 WDR33Q9C0J8 1336 aaKnown RBP10.4□□□□□ -0.74
USP3-217ENST00000560070 SCN9AQ15858 1988 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 GPR75-ASB3A0A0A6YYF3 556 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 RASSF10A6NK89 507 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 ZBTB22O15209 634 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 MAP3K12Q12852 859 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 MKRN3Q13064 507 aaKnown RBP10.4□□□□□ -0.74
USP3-217ENST00000560070 TNFAIP1Q13829 316 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 SLC9C2Q5TAH2 1124 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 MIGA2Q7L4E1 593 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 ARMC9Q7Z3E5 817 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 ADGRA1Q86SQ6 560 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 TEX11Q8IYF3 940 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 FAM151AQ8WW52 585 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 GPATCH3Q96I76 525 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 CAPNS2Q96L46 248 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 HAUS7Q99871 368 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 PAG1Q9NWQ8 432 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 FAM198AQ9UFP1 575 aa10.4□□□□□ -0.74
USP3-217ENST00000560070 PPP1R12BO60237 982 aaPredicted RBP10.39□□□□□ -0.75
USP3-217ENST00000560070 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
USP3-217ENST00000560070 BAG3O95817 575 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 CHGBP05060 677 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 RGS3P49796 1198 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 TTF1Q15361 905 aaPredicted RBP10.39□□□□□ -0.75
USP3-217ENST00000560070 RGMBQ6NW40 437 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP3-217ENST00000560070 SLC10A4Q96EP9 437 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 TEPSINQ96N21 525 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 DDX4Q9NQI0 724 aaKnown RBP10.39□□□□□ -0.75
USP3-217ENST00000560070 PPP2R3BQ9Y5P8 575 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
USP3-217ENST00000560070 GAKO14976 1311 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 ECE1P42892 770 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 RHBDL3P58872 404 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 MAPKAPK5Q8IW41 473 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 TGFBRAP1Q8WUH2 860 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 CLMNQ96JQ2 1002 aa10.38□□□□□ -0.75
USP3-217ENST00000560070 SAP30BPQ9UHR5 308 aaKnown RBP10.38□□□□□ -0.75
USP3-217ENST00000560070 SCN4AP35499 1836 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 DDTLA6NHG4 134 aaPredicted RBP10.37□□□□□ -0.75
USP3-217ENST00000560070 WDHD1O75717 1129 aaPredicted RBP10.37□□□□□ -0.75
USP3-217ENST00000560070 PDE6AP16499 860 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 IREB2P48200 963 aaKnown RBP10.37□□□□□ -0.75
USP3-217ENST00000560070 FKBP1BP68106 108 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 FKBP1CQ5VVH2 108 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 FAM83AQ86UY5 434 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 IDI2Q9BXS1 227 aa10.37□□□□□ -0.75
USP3-217ENST00000560070 MAGEB6P1A0A0J9YX57 407 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 ERC2O15083 957 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
USP3-217ENST00000560070 MX1P20591 662 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 USP5P45974 858 aa10.36□□□□□ -0.75
USP3-217ENST00000560070 PPP4CP60510 307 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms