RNA–Protein interactions for RNA: ENST00000560056.1

AC040918.1-201, humanhuman

TSL 2 BASIC

Gene AC040918.1, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040918.1-201ENST00000560056 LINC00116Q8NCU8 138 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 IL17REQ8NFR9 667 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 RTN4Q9NQC3 1192 aaKnown RBP7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 CEMIPQ8WUJ3 1361 aa7.94□□□□□ -1.14
AC040918.1-201ENST00000560056 HYAL3O43820 417 aaPredicted RBP7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 ZNF853P0CG23 659 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 ZNF530Q6P9A1 599 aaPredicted RBP7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
AC040918.1-201ENST00000560056 LAMB4A4D0S4 1761 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 CABP4P57796 275 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 CTBSQ01459 385 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 C1orf141Q5JVX7 400 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 GAS2L2Q8NHY3 880 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 RUBCNLQ9H714 662 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 ASAP1Q9ULH1 1129 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 KDM2BQ8NHM5 1336 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 CNTNAP4Q9C0A0 1308 aa7.92□□□□□ -1.14
AC040918.1-201ENST00000560056 RNMTO43148 476 aaKnown RBP7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 PHKA2P46019 1235 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 FSTL1Q12841 308 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 ITPK1Q13572 414 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 UBAP2LQ14157 1087 aaKnown RBP7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 KRT24Q2M2I5 525 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 GNASQ5JWF2 1037 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 FIGNL1Q6PIW4 674 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 WDR63Q8IWG1 891 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 NGEFQ8N5V2 710 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 PNNQ9H307 717 aaKnown RBP7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 ATG3Q9NT62 314 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 PIM2Q9P1W9 311 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 IL16Q14005 1332 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 CICQ96RK0 1608 aaPredicted RBP7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 TJP1Q07157 1748 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 TAF1LQ8IZX4 1826 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 CACNA1FO60840 1977 aa7.91□□□□□ -1.14
AC040918.1-201ENST00000560056 KCPQ6ZWJ8 1503 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 PXDNLA1KZ92 1463 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 C10orf71Q711Q0 1435 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 GNAT3A8MTJ3 354 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 KCNQ3O43525 872 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 DALRD3Q5D0E6 543 aaKnown RBP7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
AC040918.1-201ENST00000560056 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 ARID1BQ8NFD5 2236 aaPredicted RBP7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 A0A0G2JLW4 131 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 E9PSI1 815 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 BNIP3LO60238 219 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 DPEP1P16444 411 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 AMIGO3Q86WK7 504 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 MIS18AQ9NYP9 233 aa7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 N4BP2Q86UW6 1770 aaPredicted RBP7.89□□□□□ -1.15
AC040918.1-201ENST00000560056 CHL1O00533 1208 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 HTATSF1O43719 755 aaKnown RBP7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 GYS1P13807 737 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 EXOSC9Q06265 439 aaKnown RBP7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 TSPYL6Q8N831 410 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 AVENQ9NQS1 362 aaPredicted RBP7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 NDFIP2Q9NV92 336 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 IFT57Q9NWB7 429 aa7.88□□□□□ -1.15
AC040918.1-201ENST00000560056 COL5A3P25940 1745 aaPredicted RBP7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 RNF123Q5XPI4 1314 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 ZNF831Q5JPB2 1677 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 NEFMP07197 916 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 LMOD3Q0VAK6 560 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 RNF20Q5VTR2 975 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 SMIM5Q71RC9 77 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 C8orf58Q8NAV2 365 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 SMC1BQ8NDV3 1235 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 ZSCAN10Q96SZ4 725 aaPredicted RBP7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 RNF181Q9P0P0 153 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 LAS1LQ9Y4W2 734 aaKnown RBP7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 MYH14Q7Z406 1995 aaKnown RBP7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 UTRNP46939 3433 aa7.87□□□□□ -1.15
AC040918.1-201ENST00000560056 HEG1Q9ULI3 1381 aa7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 USP42Q9H9J4 1324 aaKnown RBP7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 PTCD1O75127 700 aaKnown RBP7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 MSX1P28360 303 aa7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 CRKLP46109 303 aaKnown RBP7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 SLC39A6Q13433 755 aa7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 TMEM214Q6NUQ4 689 aaKnown RBP7.86□□□□□ -1.15
AC040918.1-201ENST00000560056 SLC52A2Q9HAB3 445 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms