RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NAPBQ9H115 298 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
SMAD3-212ENST00000559937 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 MRVI1Q9Y6F6 885 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 COL4A1P02462 1669 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 GSG1L2A8MUP6 293 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 GOLGA6L6A8MZA4 724 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 SEMA3EO15041 775 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 NR1I2O75469 434 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 MBD4O95243 580 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 APPP05067 770 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 TPM2P07951 284 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 FAM160A1Q05DH4 1040 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 CHRNDQ07001 517 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 APOA5Q6Q788 366 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 CHST3Q7LGC8 479 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 ANKRD18AQ8IVF6 992 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 CCAR1Q8IX12 1150 aaKnown RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 MAGEB6Q8N7X4 407 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 ENGASEQ8NFI3 743 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 STAG1Q8WVM7 1258 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 NYXQ9GZU5 481 aa9.43□□□□□ -0.9
SMAD3-212ENST00000559937 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-212ENST00000559937 KINO60870 393 aaKnown RBP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 KIF23Q02241 960 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 ADALQ6DHV7 355 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 LINC00301Q8NCQ3 95 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 MRPS27Q92552 414 aaKnown RBP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 WASF1Q92558 559 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 EPB41L4AQ9HCS5 686 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 ANAPC4Q9UJX5 808 aa9.42□□□□□ -0.9
SMAD3-212ENST00000559937 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMAD3-212ENST00000559937 NEDD4P46934 1319 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 GOLGA8AA7E2F4 631 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 B4E1Z4 1266 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 ZBTB43O43298 467 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 RPS6KA4O75676 772 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 PCP11498 1178 aaKnown RBP9.41□□□□□ -0.9
SMAD3-212ENST00000559937 CDC25BP30305 580 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 BCAMP50895 628 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 SART3Q15020 963 aaKnown RBP9.41□□□□□ -0.9
SMAD3-212ENST00000559937 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 CAMK4Q16566 473 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 STX1AQ16623 288 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 TMEM67Q5HYA8 995 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 MFSD6Q6ZSS7 791 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 FSIP1Q8NA03 581 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 LINC00116Q8NCU8 138 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 ALG1Q9BT22 464 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 CBX8Q9HC52 389 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 NARFQ9UHQ1 456 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 DENND2AQ9ULE3 1009 aa9.41□□□□□ -0.9
SMAD3-212ENST00000559937 A0A0G2JS52 829 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 SPTLC2O15270 562 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 IFNAR1P17181 557 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
SMAD3-212ENST00000559937 ME1P48163 572 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 TDO2P48775 406 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 NT5C2P49902 561 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 ZNF165P49910 485 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 FOSBP53539 338 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 GUCY1B3Q02153 619 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 SNW1Q13573 536 aaKnown RBP9.4□□□□□ -0.9
SMAD3-212ENST00000559937 STK38Q15208 465 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 NTRK3Q16288 839 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 ERFEQ4G0M1 354 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 CAVIN4Q5BKX8 364 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 SYNE3Q6ZMZ3 975 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 KRT27Q7Z3Y8 459 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-212ENST00000559937 JMYQ8N9B5 988 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 PIBF1Q8WXW3 757 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 GOLPH3LQ9H4A5 285 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 ARMT1Q9H993 441 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 ANO10Q9NW15 660 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 LRP2BPQ9P2M1 347 aa9.4□□□□□ -0.9
SMAD3-212ENST00000559937 PCDHA7Q9UN72 937 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms