RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HDAC9Q9UKV0 1011 aa21.64■■□□□ 1.06
CLPX-203ENST00000558958 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.06
CLPX-203ENST00000558958 PATL2C9JE40 543 aaKnown RBP21.64■■□□□ 1.05
CLPX-203ENST00000558958 PRKAB2O43741 272 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 MMP14P50281 582 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 APOBEC3HQ6NTF7 200 aaKnown RBP21.64■■□□□ 1.05
CLPX-203ENST00000558958 GPC2Q8N158 579 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 OGFOD1Q8N543 542 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 DPF2Q92785 391 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 SLC4A4Q9Y6R1 1079 aa21.64■■□□□ 1.05
CLPX-203ENST00000558958 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
CLPX-203ENST00000558958 PLCG2P16885 1265 aa21.63■■□□□ 1.05
CLPX-203ENST00000558958 GMPSP49915 693 aaPredicted RBP21.63■■□□□ 1.05
CLPX-203ENST00000558958 SH3RF3Q8TEJ3 882 aaPredicted RBP21.63■■□□□ 1.05
CLPX-203ENST00000558958 TBC1D32Q96NH3 1257 aa21.63■■□□□ 1.05
CLPX-203ENST00000558958 CRNKL1Q9BZJ0 848 aaKnown RBP21.63■■□□□ 1.05
CLPX-203ENST00000558958 RBM8AQ9Y5S9 174 aaKnown RBP21.63■■□□□ 1.05
CLPX-203ENST00000558958 RPAP1Q9BWH6 1393 aaPredicted RBP21.63■■□□□ 1.05
CLPX-203ENST00000558958 GSG1L2A8MUP6 293 aa21.62■■□□□ 1.05
CLPX-203ENST00000558958 RBM25P49756 843 aaKnown RBP21.62■■□□□ 1.05
CLPX-203ENST00000558958 RHBDL3P58872 404 aa21.62■■□□□ 1.05
CLPX-203ENST00000558958 CFAP100Q494V2 611 aa21.62■■□□□ 1.05
CLPX-203ENST00000558958 U3KPZ7 1027 aaPredicted RBP21.62■■□□□ 1.05
CLPX-203ENST00000558958 ADAMTSL1Q8N6G6 1762 aa21.61■■□□□ 1.05
CLPX-203ENST00000558958 HSPA4P34932 840 aa21.61■■□□□ 1.05
CLPX-203ENST00000558958 RBM5P52756 815 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLPX-203ENST00000558958 ZNF280AP59817 542 aaPredicted RBP21.61■■□□□ 1.05
CLPX-203ENST00000558958 ALX1Q15699 326 aa21.61■■□□□ 1.05
CLPX-203ENST00000558958 PCDHAC2Q9Y5I4 1007 aa21.61■■□□□ 1.05
CLPX-203ENST00000558958 ZC3H4Q9UPT8 1303 aaKnown RBP21.61■■□□□ 1.05
CLPX-203ENST00000558958 FGAP02671 866 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 APPP05067 770 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 NECTIN1Q15223 517 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 IFNL3Q8IZI9 196 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 MTMR14Q8NCE2 650 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 SDR42E1Q8WUS8 393 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 EPB41L4AQ9HCS5 686 aaPredicted RBP21.6■■□□□ 1.05
CLPX-203ENST00000558958 TSHZ2Q9NRE2 1034 aa21.6■■□□□ 1.05
CLPX-203ENST00000558958 MCCP23508 829 aa21.59■■□□□ 1.05
CLPX-203ENST00000558958 GIMAP6Q6P9H5 292 aa21.59■■□□□ 1.05
CLPX-203ENST00000558958 NACAP1Q9BZK3 213 aa21.59■■□□□ 1.05
CLPX-203ENST00000558958 CNOT7Q9UIV1 285 aaKnown RBP21.59■■□□□ 1.05
CLPX-203ENST00000558958 ZMYM6O95789 1325 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 SHTN1A0MZ66 631 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 SPDYE2BA6NHP3 402 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 SPDYE6P0CI01 402 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 DLGAP5Q15398 846 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 CDC42EP5Q6NZY7 148 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 MICALL2Q8IY33 904 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 TEX11Q8IYF3 940 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 PRMT6Q96LA8 375 aaPredicted RBP21.58■■□□□ 1.05
CLPX-203ENST00000558958 ATP8A2Q9NTI2 1148 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 USP40Q9NVE5 1235 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 CTNNA3Q9UI47 895 aa21.58■■□□□ 1.05
CLPX-203ENST00000558958 DDNO94850 711 aaPredicted RBP21.58■■□□□ 1.04
CLPX-203ENST00000558958 CREB3L3Q68CJ9 461 aa21.58■■□□□ 1.04
CLPX-203ENST00000558958 KCNB2Q92953 911 aa21.58■■□□□ 1.04
CLPX-203ENST00000558958 ZBED3Q96IU2 234 aaPredicted RBP21.58■■□□□ 1.04
CLPX-203ENST00000558958 MYOZ2Q9NPC6 264 aa21.58■■□□□ 1.04
CLPX-203ENST00000558958 MKRN1Q9UHC7 482 aaKnown RBP21.58■■□□□ 1.04
CLPX-203ENST00000558958 TGFBRAP1Q8WUH2 860 aa21.57■■□□□ 1.04
CLPX-203ENST00000558958 NAPBQ9H115 298 aa21.57■■□□□ 1.04
CLPX-203ENST00000558958 DCP1AQ9NPI6 582 aaPredicted RBP21.57■■□□□ 1.04
CLPX-203ENST00000558958 GPRC5DQ9NZD1 345 aa21.57■■□□□ 1.04
CLPX-203ENST00000558958 PALD1Q9ULE6 856 aa21.57■■□□□ 1.04
CLPX-203ENST00000558958 SLC27A2O14975 620 aa21.56■■□□□ 1.04
CLPX-203ENST00000558958 WDHD1O75717 1129 aaPredicted RBP21.56■■□□□ 1.04
CLPX-203ENST00000558958 USP5P45974 858 aa21.56■■□□□ 1.04
CLPX-203ENST00000558958 TDO2P48775 406 aa21.56■■□□□ 1.04
CLPX-203ENST00000558958 DPY19L2Q6NUT2 758 aa21.56■■□□□ 1.04
CLPX-203ENST00000558958 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
CLPX-203ENST00000558958 CYP21A2P08686 494 aa21.55■■□□□ 1.04
CLPX-203ENST00000558958 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
CLPX-203ENST00000558958 RASEFQ8IZ41 740 aa21.55■■□□□ 1.04
CLPX-203ENST00000558958 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
CLPX-203ENST00000558958 H7C1D1 291 aa21.54■■□□□ 1.04
CLPX-203ENST00000558958 ANAPC15P60006 121 aa21.54■■□□□ 1.04
CLPX-203ENST00000558958 IL17RAQ96F46 866 aa21.54■■□□□ 1.04
CLPX-203ENST00000558958 TDRD3Q9H7E2 651 aaKnown RBP21.54■■□□□ 1.04
CLPX-203ENST00000558958 WNT10BO00744 389 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 EGFRP00533 1210 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 ZKSCAN1P17029 563 aaPredicted RBP21.53■■□□□ 1.04
CLPX-203ENST00000558958 IMMTQ16891 758 aaKnown RBP21.53■■□□□ 1.04
CLPX-203ENST00000558958 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 SAMD7Q7Z3H4 446 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 MAPKAPK5Q8IW41 473 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 KIF2CQ99661 725 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 IDI2Q9BXS1 227 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 SNX14Q9Y5W7 946 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 FLT1P17948 1338 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 CDK5RAP2Q96SN8 1893 aa21.53■■□□□ 1.04
CLPX-203ENST00000558958 GLTPD2A6NH11 291 aa21.52■■□□□ 1.04
CLPX-203ENST00000558958 ZNF213O14771 459 aa21.52■■□□□ 1.04
CLPX-203ENST00000558958 CTR9Q6PD62 1173 aa21.52■■□□□ 1.04
CLPX-203ENST00000558958 L3MBTL3Q96JM7 780 aaPredicted RBP21.52■■□□□ 1.04
CLPX-203ENST00000558958 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
CLPX-203ENST00000558958 TAF6LQ9Y6J9 622 aa21.52■■□□□ 1.04
CLPX-203ENST00000558958 USP17L12C9JPN9 530 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 USP17L21D6R901 530 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms