RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DRD2P14416 443 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 PSMD2Q13200 908 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 TMC4Q7Z404 712 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 C2CD4AQ8NCU7 369 aaPredicted RBP6.58□□□□□ -1.36
VPS13C-207ENST00000558919 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 WDR18Q9BV38 432 aa6.58□□□□□ -1.36
VPS13C-207ENST00000558919 CCDC86Q9H6F5 360 aaKnown RBP6.58□□□□□ -1.36
VPS13C-207ENST00000558919 SLFN14P0C7P3 912 aa6.57□□□□□ -1.36
VPS13C-207ENST00000558919 FSTP19883 344 aa6.57□□□□□ -1.36
VPS13C-207ENST00000558919 BMP6P22004 513 aa6.57□□□□□ -1.36
VPS13C-207ENST00000558919 ITGAEP38570 1179 aa6.57□□□□□ -1.36
VPS13C-207ENST00000558919 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
VPS13C-207ENST00000558919 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
VPS13C-207ENST00000558919 TTF2Q9UNY4 1162 aaKnown RBP6.57□□□□□ -1.36
VPS13C-207ENST00000558919 ZNF862O60290 1169 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 FBXO24O75426 580 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 LIG1P18858 919 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
VPS13C-207ENST00000558919 USP11P51784 963 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 AKAP4Q5JQC9 854 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 SCARA3Q6AZY7 606 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 BEND4Q6ZU67 534 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 KCNB2Q92953 911 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 YIPF2Q9BWQ6 316 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 ZC3H12CQ9C0D7 883 aaKnown RBP6.56□□□□□ -1.36
VPS13C-207ENST00000558919 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
VPS13C-207ENST00000558919 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
VPS13C-207ENST00000558919 PAGE1O75459 146 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 TAGLNQ01995 201 aaKnown RBP6.55□□□□□ -1.36
VPS13C-207ENST00000558919 LRRC14Q15048 493 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 EZH1Q92800 747 aaPredicted RBP6.55□□□□□ -1.36
VPS13C-207ENST00000558919 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
VPS13C-207ENST00000558919 BCL2L13Q9BXK5 485 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 CBX8Q9HC52 389 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 CYP8B1Q9UNU6 501 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 AP4E1Q9UPM8 1137 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
VPS13C-207ENST00000558919 HMX2A2RU54 273 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 TMPRSS2O15393 492 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 SORBS3O60504 671 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 TRIM37O94972 964 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 CELA3AP09093 270 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 RXRBP28702 533 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 MFAP1P55081 439 aaKnown RBP6.54□□□□□ -1.36
VPS13C-207ENST00000558919 ID3Q02535 119 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
VPS13C-207ENST00000558919 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
VPS13C-207ENST00000558919 RNF43Q68DV7 783 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 DYMQ7RTS9 669 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 PPP1R9AQ9ULJ8 1098 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
VPS13C-207ENST00000558919 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 BTBD11A6QL63 1104 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 ASPAP45381 313 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 ST13P50502 369 aaKnown RBP6.53□□□□□ -1.36
VPS13C-207ENST00000558919 NFIAQ12857 509 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 PCNX4Q63HM2 1172 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 LLGL2Q6P1M3 1020 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 FBLIM1Q8WUP2 373 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 USP31Q70CQ4 1352 aa6.53□□□□□ -1.36
VPS13C-207ENST00000558919 CTSHP09668 335 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 TRIM26Q12899 539 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-207ENST00000558919 MAP7Q14244 749 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 TAF1CQ15572 869 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-207ENST00000558919 CCDC85BQ15834 202 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-207ENST00000558919 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 GRIN3AQ8TCU5 1115 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 FAM105AQ9NUU6 356 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
VPS13C-207ENST00000558919 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
VPS13C-207ENST00000558919 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
VPS13C-207ENST00000558919 ZMYM1Q5SVZ6 1142 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 MEI1Q5TIA1 1274 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 RASIP1Q5U651 963 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 TTBK2Q6IQ55 1244 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 GIPC2Q8TF65 315 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 ACSBG1Q96GR2 724 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 CRELD1Q96HD1 420 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 NOC4LQ9BVI4 516 aaKnown RBP6.51□□□□□ -1.37
VPS13C-207ENST00000558919 BCL11AQ9H165 835 aa6.51□□□□□ -1.37
VPS13C-207ENST00000558919 RLBP1P12271 317 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms