RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 TNNI2P48788 182 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 TCP10Q12799 353 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 FAM83AQ86UY5 434 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
VPS18-203ENST00000558855 OTUD5Q96G74 571 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 MAST3O60307 1309 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
VPS18-203ENST00000558855 DOCK1Q14185 1865 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 INPP5BP32019 993 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 MIGA2Q7L4E1 593 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 TMEM57Q8N5G2 664 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
VPS18-203ENST00000558855 BRCA2P51587 3418 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 ATAD5Q96QE3 1844 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 A0A1B0GUL7 405 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 ALDH1A1P00352 501 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 INHBEP58166 350 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 FKBP1CQ5VVH2 108 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 FBXO46Q6PJ61 603 aaPredicted RBP16.85■□□□□ 0.29
VPS18-203ENST00000558855 OTOP1Q7RTM1 612 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
VPS18-203ENST00000558855 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
VPS18-203ENST00000558855 LDHBP07195 334 aaKnown RBP16.84■□□□□ 0.29
VPS18-203ENST00000558855 GNAI3P08754 354 aa16.84■□□□□ 0.29
VPS18-203ENST00000558855 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
VPS18-203ENST00000558855 CCL15Q16663 113 aa16.84■□□□□ 0.29
VPS18-203ENST00000558855 SH3BP5LQ7L8J4 393 aa16.84■□□□□ 0.29
VPS18-203ENST00000558855 FAM151AQ8WW52 585 aa16.84■□□□□ 0.29
VPS18-203ENST00000558855 GAKO14976 1311 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 RLBP1P12271 317 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 FOCADQ5VW36 1801 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 DDX4Q9NQI0 724 aaKnown RBP16.83■□□□□ 0.28
VPS18-203ENST00000558855 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
VPS18-203ENST00000558855 IRF6O14896 467 aa16.82■□□□□ 0.28
VPS18-203ENST00000558855 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
VPS18-203ENST00000558855 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
VPS18-203ENST00000558855 CSADQ9Y600 493 aa16.82■□□□□ 0.28
VPS18-203ENST00000558855 MGAMO43451 1857 aa16.82■□□□□ 0.28
VPS18-203ENST00000558855 MKI67P46013 3256 aaKnown RBP16.81■□□□□ 0.28
VPS18-203ENST00000558855 BTBD19C9JJ37 291 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 SEMA3EO15041 775 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 ZBTB22O15209 634 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 RGS3P49796 1198 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 ZNF112Q9UJU3 913 aa16.81■□□□□ 0.28
VPS18-203ENST00000558855 PDS5AQ29RF7 1337 aaKnown RBP16.8■□□□□ 0.28
VPS18-203ENST00000558855 GNAI2P04899 355 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 MOGSQ13724 837 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
VPS18-203ENST00000558855 TBC1D9Q6ZT07 1266 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 ARHGAP39Q9C0H5 1083 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
VPS18-203ENST00000558855 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
VPS18-203ENST00000558855 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
VPS18-203ENST00000558855 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
VPS18-203ENST00000558855 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
VPS18-203ENST00000558855 GTF2A2P52657 109 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 MECOMQ03112 1051 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 PPIL2Q13356 520 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 POLA2Q14181 598 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 PTPN22Q9Y2R2 807 aa16.79■□□□□ 0.28
VPS18-203ENST00000558855 MROH7-TTC4A0A0A0MT08 1334 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 POTEFA5A3E0 1075 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
VPS18-203ENST00000558855 CTGFP29279 349 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 MCAMP43121 646 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 BTDP43251 543 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 RHBDL3P58872 404 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 SP3Q02447 781 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 DCAF15Q66K64 600 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
VPS18-203ENST00000558855 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
VPS18-203ENST00000558855 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
VPS18-203ENST00000558855 ADGRA2Q96PE1 1338 aa16.77■□□□□ 0.28
VPS18-203ENST00000558855 PHF20L1A8MW92 1017 aa16.77■□□□□ 0.28
VPS18-203ENST00000558855 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
VPS18-203ENST00000558855 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.28
VPS18-203ENST00000558855 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms