RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 TRAK2O60296 914 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 DOK7Q18PE1 504 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 BRF1Q92994 677 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 PSMD1Q99460 953 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 ARMT1Q9H993 441 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
SMAD3-207ENST00000558763 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 NFKBIEO00221 500 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 PPIP5K2O43314 1243 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 SYT1P21579 422 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 GJB2P29033 226 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 ANTXR2P58335 489 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 SMC3Q9UQE7 1217 aa15.33■□□□□ 0.05
SMAD3-207ENST00000558763 G3V3G9 751 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 DEKP35659 375 aaKnown RBP15.33■□□□□ 0.04
SMAD3-207ENST00000558763 RASSF7Q02833 373 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 GSE1Q14687 1217 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-207ENST00000558763 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-207ENST00000558763 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 CD209Q9NNX6 404 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.04
SMAD3-207ENST00000558763 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
SMAD3-207ENST00000558763 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
SMAD3-207ENST00000558763 PRKAB2O43741 272 aa15.32■□□□□ 0.04
SMAD3-207ENST00000558763 EVCP57679 992 aa15.32■□□□□ 0.04
SMAD3-207ENST00000558763 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
SMAD3-207ENST00000558763 RIOK1Q9BRS2 568 aaKnown RBP15.32■□□□□ 0.04
SMAD3-207ENST00000558763 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
SMAD3-207ENST00000558763 ZNF213O14771 459 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMAD3-207ENST00000558763 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-207ENST00000558763 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 MIGA1Q8NAN2 632 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-207ENST00000558763 LMBRD1Q9NUN5 540 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 WDR33Q9C0J8 1336 aaKnown RBP15.31■□□□□ 0.04
SMAD3-207ENST00000558763 COL4A5P29400 1685 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 STX6O43752 255 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 PFKFB2O60825 505 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 CYP7A1P22680 504 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 APOBRQ0VD83 1088 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 SCRN1Q12765 414 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 STK3Q13188 491 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 MCTP1Q6DN14 999 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 LARGE2Q8N3Y3 721 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
SMAD3-207ENST00000558763 COA1Q9GZY4 146 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 MTMR6Q9Y217 621 aa15.31■□□□□ 0.04
SMAD3-207ENST00000558763 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
SMAD3-207ENST00000558763 IL1R1P14778 569 aa15.3■□□□□ 0.04
SMAD3-207ENST00000558763 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
SMAD3-207ENST00000558763 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
SMAD3-207ENST00000558763 NEDD4P46934 1319 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 ECE2O60344 883 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-207ENST00000558763 IARSP41252 1262 aaKnown RBP15.29■□□□□ 0.04
SMAD3-207ENST00000558763 NCOA7Q8NI08 942 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 CTDNEP1O95476 244 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 APPP05067 770 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 GNAT2P19087 354 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 PRDX5P30044 214 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 SMARCC2Q8TAQ2 1214 aa15.29■□□□□ 0.04
SMAD3-207ENST00000558763 LAMB1P07942 1786 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 PRC1O43663 620 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 JAK2O60674 1132 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 PTMSP20962 102 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 MECOMQ03112 1051 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 SLC4A4Q9Y6R1 1079 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 LTBP3Q9NS15 1303 aa15.28■□□□□ 0.04
SMAD3-207ENST00000558763 SCN9AQ15858 1988 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 F13A1P00488 732 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
SMAD3-207ENST00000558763 MCM5P33992 734 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 PRELPP51888 382 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 GTF2IP78347 998 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 GPR162Q16538 588 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 ZNF274Q96GC6 653 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-207ENST00000558763 NAPBQ9H115 298 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.04
SMAD3-207ENST00000558763 DYNLL1P63167 89 aaKnown RBP15.27■□□□□ 0.03
SMAD3-207ENST00000558763 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.03
SMAD3-207ENST00000558763 PODNQ7Z5L7 613 aa15.27■□□□□ 0.03
SMAD3-207ENST00000558763 NSUN7Q8NE18 718 aaKnown RBP15.27■□□□□ 0.03
SMAD3-207ENST00000558763 SDR42E1Q8WUS8 393 aa15.27■□□□□ 0.03
SMAD3-207ENST00000558763 INCENPQ9NQS7 918 aa15.27■□□□□ 0.03
SMAD3-207ENST00000558763 BRPF3Q9ULD4 1205 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms