RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GGA1Q9UJY5 639 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 GOLGA8AA7E2F4 631 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 LDHBP07195 334 aaKnown RBP12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 GPSM2P81274 684 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 SLC12A7Q9Y666 1083 aa12.67□□□□□ -0.38
CSPG4P5-201ENST00000558731 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 USP17L12C9JPN9 530 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 USP17L21D6R901 530 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 CAMK4Q16566 473 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 SAP30BPQ9UHR5 308 aaKnown RBP12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 SF3A1Q15459 793 aaKnown RBP12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 ATRNO75882 1429 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
CSPG4P5-201ENST00000558731 hCG_1642624A0A1W2PR95 340 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 SYAP1Q96A49 352 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 XDHP47989 1333 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ZBTB43O43298 467 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 RAD21O60216 631 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 MBD3O95983 291 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ADRA2BP18089 450 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ZNF512BQ96KM6 892 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 BTAF1O14981 1849 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 ANTXR2P58335 489 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 GTF2IP78347 998 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 EVX2Q03828 476 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 PPARAQ07869 468 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
CSPG4P5-201ENST00000558731 PFKFB2O60825 505 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 CYP2D6P10635 497 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 WTAPQ15007 396 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 PICALMQ13492 652 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 TM4SF1P30408 202 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 RBM5P52756 815 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 EZH2Q15910 746 aaKnown RBP12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 MFSD14BQ5SR56 506 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 MPNDQ8N594 471 aa12.64□□□□□ -0.39
CSPG4P5-201ENST00000558731 GNAT2P19087 354 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 TRIM29Q14134 588 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 AKAP17AQ02040 695 aaKnown RBP12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
CSPG4P5-201ENST00000558731 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 ME1P48163 572 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 GRIK5Q16478 980 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 FBXO33Q7Z6M2 555 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 KRT23Q9C075 422 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 MYH3P11055 1940 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 USP17L8P0C7I0 530 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 MRE11P49959 708 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 SCNN1DP51172 638 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 CTDNEP1O95476 244 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms